Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU460467 |
| length | 589 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G388463 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 17035459 ~ 17036456 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU460231 | lncRNA | upstream | 33097 | 16999736 ~ 17002362 (+) | True | G388276 |
| TU460179 | lncRNA | upstream | 179050 | 16851388 ~ 16856409 (+) | True | G388236 |
| XR_004577438.1 | lncRNA | upstream | 364743 | 16669005 ~ 16670716 (+) | True | LOC113531478 |
| TU460063 | lncRNA | upstream | 585792 | 16449464 ~ 16449667 (+) | True | G388145 |
| TU459867 | lncRNA | upstream | 674458 | 16350041 ~ 16361001 (+) | True | G387973 |
| TU460474 | lncRNA | downstream | 10947 | 17047403 ~ 17057491 (+) | True | G388468 |
| TU460477 | lncRNA | downstream | 12631 | 17049087 ~ 17055910 (+) | False | G388468 |
| TU460543 | lncRNA | downstream | 133997 | 17170453 ~ 17170679 (+) | True | G388514 |
| TU460537 | lncRNA | downstream | 157868 | 17194324 ~ 17202617 (+) | True | G388508 |
| TU460533 | lncRNA | downstream | 173561 | 17210017 ~ 17229244 (+) | True | G388507 |
| XM_026921741.2 | mRNA | upstream | 41594 | 16982196 ~ 16993865 (+) | True | hnrnpl |
| XM_026921742.2 | mRNA | upstream | 41594 | 16982196 ~ 16993865 (+) | False | hnrnpl |
| XM_026921760.2 | mRNA | upstream | 53844 | 16976489 ~ 16981615 (+) | True | kptn |
| XM_034300678.1 | mRNA | upstream | 85414 | 16944596 ~ 16950045 (+) | True | h3f3c |
| XM_026921770.2 | mRNA | downstream | 28445 | 17064901 ~ 17069817 (+) | True | ckma |
| XM_026921546.2 | mRNA | downstream | 241397 | 17277853 ~ 17280577 (+) | False | LOC113531069 |
| XM_026921473.2 | mRNA | downstream | 245533 | 17281989 ~ 17286434 (+) | False | rpl36a |
| XM_026922530.2 | mRNA | downstream | 281410 | 17317866 ~ 17322251 (+) | True | tnfsf10l4 |
| XM_026922269.2 | mRNA | downstream | 293640 | 17330096 ~ 17338411 (+) | True | mtnr1c |
| TU460111 | other | upstream | 378346 | 16655669 ~ 16657113 (+) | True | LOC113531241 |
| TU460079 | other | upstream | 479927 | 16546141 ~ 16555532 (+) | False | cdc42ep2 |
| trnam-cau_49 | other | upstream | 887027 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
| TU459555 | other | upstream | 996854 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| XR_004577401.1 | other | upstream | 1668212 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| LOC117596262 | other | downstream | 239043 | 17275499 ~ 17276968 (+) | True | LOC117596262 |
| TU460579 | other | downstream | 241434 | 17277890 ~ 17280519 (+) | True | LOC113531069 |
| XR_003403218.2 | other | downstream | 242011 | 17278467 ~ 17280328 (+) | False | LOC113531069 |
| TU460582 | other | downstream | 245588 | 17282044 ~ 17289481 (+) | True | rpl36a |
| TU460613 | other | downstream | 304969 | 17341425 ~ 17344799 (+) | False | vma21 |
