Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026921636.2 |
| length | 973 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 3 |
| gene id | tlcd5b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 14858557 ~ 14860744 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU458889 | lncRNA | upstream | 142502 | 14708856 ~ 14716055 (+) | True | G387160 |
| XR_004577415.1 | lncRNA | upstream | 674506 | 14152144 ~ 14184051 (+) | False | LOC117596237 |
| TU458144 | lncRNA | upstream | 683132 | 14170058 ~ 14175425 (+) | True | G386495 |
| XR_004577416.1 | lncRNA | upstream | 704415 | 14152144 ~ 14154142 (+) | True | LOC117596237 |
| TU458138 | lncRNA | upstream | 727930 | 14130171 ~ 14130627 (+) | True | G386490 |
| TU458941 | lncRNA | downstream | 73960 | 14934704 ~ 14936042 (+) | True | G387208 |
| TU459148 | lncRNA | downstream | 302640 | 15163384 ~ 15233645 (+) | False | c27h11orf88 |
| TU459154 | lncRNA | downstream | 321569 | 15182313 ~ 15204882 (+) | False | LOC113531625 |
| TU459156 | lncRNA | downstream | 321569 | 15182313 ~ 15204587 (+) | False | LOC113531625 |
| TU459153 | lncRNA | downstream | 342719 | 15203463 ~ 15204587 (+) | True | LOC113531625 |
| XM_026921630.2 | mRNA | upstream | 2616 | 14811102 ~ 14855941 (+) | False | mcama |
| XM_026921632.2 | mRNA | upstream | 2616 | 14811104 ~ 14855941 (+) | True | mcama |
| XM_026921631.2 | mRNA | upstream | 2616 | 14811108 ~ 14855941 (+) | False | mcama |
| XM_026921633.2 | mRNA | upstream | 2616 | 14811472 ~ 14855941 (+) | False | mcama |
| XM_026921634.2 | mRNA | upstream | 62617 | 14792133 ~ 14795940 (+) | True | mis12 |
| XM_034300511.1 | mRNA | downstream | 1614 | 14862358 ~ 14916498 (+) | True | arhgef12b |
| XM_026922535.2 | mRNA | downstream | 236324 | 15097068 ~ 15138075 (+) | True | drd2b |
| XM_026921448.2 | mRNA | downstream | 365601 | 15226345 ~ 15233692 (+) | True | c27h11orf88 |
| XM_026921447.2 | mRNA | downstream | 374175 | 15234919 ~ 15242995 (+) | True | layna |
| XM_034300431.1 | mRNA | downstream | 374175 | 15234919 ~ 15242995 (+) | False | layna |
| TU457943 | other | upstream | 1030409 | 13825850 ~ 13828148 (+) | True | G386325 |
| TU457909 | other | upstream | 1034502 | 13821788 ~ 13824055 (+) | True | G386294 |
| XR_003403209.2 | other | upstream | 3547704 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU455978 | other | upstream | 4478892 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 5090521 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_004577401.1 | other | downstream | 500614 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 1174079 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| trnam-cau_49 | other | downstream | 1287616 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
| TU460079 | other | downstream | 1685397 | 16546141 ~ 16555532 (+) | False | cdc42ep2 |
| TU460111 | other | downstream | 1794925 | 16655669 ~ 16657113 (+) | True | LOC113531241 |
