Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026921802.2 |
| length | 936 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 6 |
| gene id | epd |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 16643263 ~ 16647421 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007160 | cell-matrix adhesion | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU460063 | lncRNA | upstream | 193596 | 16449464 ~ 16449667 (+) | True | G388145 |
| TU459867 | lncRNA | upstream | 282262 | 16350041 ~ 16361001 (+) | True | G387973 |
| TU459830 | lncRNA | upstream | 422444 | 16218765 ~ 16220819 (+) | True | G387939 |
| TU459829 | lncRNA | upstream | 425032 | 16217763 ~ 16218231 (+) | True | G387938 |
| TU459828 | lncRNA | upstream | 425596 | 16217037 ~ 16217667 (+) | True | G387937 |
| XR_004577438.1 | lncRNA | downstream | 21584 | 16669005 ~ 16670716 (+) | True | LOC113531478 |
| TU460179 | lncRNA | downstream | 203967 | 16851388 ~ 16856409 (+) | True | G388236 |
| TU460231 | lncRNA | downstream | 352315 | 16999736 ~ 17002362 (+) | True | G388276 |
| TU460466 | lncRNA | downstream | 388038 | 17035459 ~ 17036456 (+) | False | G388463 |
| TU460467 | lncRNA | downstream | 388038 | 17035459 ~ 17036456 (+) | True | G388463 |
| XM_034300824.1 | mRNA | upstream | 19964 | 16593426 ~ 16623299 (+) | False | myo1ca |
| XM_026921762.2 | mRNA | downstream | 946 | 16648367 ~ 16654488 (+) | True | panx1b |
| XM_026921819.2 | mRNA | downstream | 8513 | 16655934 ~ 16657093 (+) | False | LOC113531241 |
| XM_026921758.2 | mRNA | downstream | 135328 | 16782749 ~ 16788901 (+) | True | tmprss4b |
| XM_026921798.2 | mRNA | downstream | 173880 | 16821301 ~ 16827209 (+) | True | pafah1b2 |
| XM_026921785.2 | mRNA | downstream | 182561 | 16829982 ~ 16831949 (+) | True | apoa1a |
| TU460079 | other | upstream | 87731 | 16546141 ~ 16555532 (+) | False | cdc42ep2 |
| trnam-cau_49 | other | upstream | 494831 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
| TU459555 | other | upstream | 604658 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| XR_004577401.1 | other | upstream | 1276016 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU457943 | other | upstream | 2815115 | 13825850 ~ 13828148 (+) | True | G386325 |
| TU460111 | other | downstream | 8248 | 16655669 ~ 16657113 (+) | True | LOC113531241 |
| LOC117596262 | other | downstream | 628078 | 17275499 ~ 17276968 (+) | True | LOC117596262 |
| TU460579 | other | downstream | 630469 | 17277890 ~ 17280519 (+) | True | LOC113531069 |
| XR_003403218.2 | other | downstream | 631046 | 17278467 ~ 17280328 (+) | False | LOC113531069 |
| TU460582 | other | downstream | 634623 | 17282044 ~ 17289481 (+) | True | rpl36a |
