Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034300544.1 |
| length | 843 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 4 |
| gene id | arpc5lb |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 10367257 ~ 10378138 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0030833 | regulation of actin filament polymerization | biological_process |
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU456007 | lncRNA | upstream | 5772 | 10361255 ~ 10361490 (+) | True | G384608 |
| TU456006 | lncRNA | upstream | 8764 | 10358270 ~ 10358498 (+) | True | G384607 |
| TU456005 | lncRNA | upstream | 8999 | 10357659 ~ 10358263 (+) | True | G384606 |
| TU455967 | lncRNA | upstream | 60354 | 10306674 ~ 10306908 (+) | True | G384583 |
| TU455799 | lncRNA | upstream | 237731 | 10129243 ~ 10129531 (+) | True | G384466 |
| TU455977 | lncRNA | downstream | 2432 | 10380570 ~ 10388271 (+) | True | G384592 |
| XR_003403244.2 | lncRNA | downstream | 103996 | 10482134 ~ 10490299 (+) | True | LOC113531306 |
| TU456108 | lncRNA | downstream | 181867 | 10560005 ~ 10560651 (+) | True | G384700 |
| TU456113 | lncRNA | downstream | 188166 | 10566304 ~ 10566511 (+) | True | G384705 |
| TU456133 | lncRNA | downstream | 214138 | 10592276 ~ 10592482 (+) | True | G384725 |
| XM_026922385.2 | mRNA | upstream | 25758 | 10320064 ~ 10341504 (+) | True | cabp7b |
| XM_026922013.2 | mRNA | upstream | 82711 | 10272650 ~ 10284551 (+) | True | taok3b |
| XM_026922015.2 | mRNA | upstream | 105517 | 10252587 ~ 10261745 (+) | True | tescb |
| XM_026921463.2 | mRNA | upstream | 144230 | 10211942 ~ 10223032 (+) | True | LOC113531012 |
| XM_026922386.2 | mRNA | upstream | 181101 | 10184088 ~ 10186161 (+) | True | hspb15 |
| XM_026921623.2 | mRNA | downstream | 407419 | 10785557 ~ 10825976 (+) | True | ppp1cc |
| XM_034300946.1 | mRNA | downstream | 647730 | 11025868 ~ 11096141 (+) | False | fer |
| XM_026922376.2 | mRNA | downstream | 647731 | 11025869 ~ 11096141 (+) | False | fer |
| XM_026922377.2 | mRNA | downstream | 649019 | 11027157 ~ 11096141 (+) | True | fer |
| XM_034300944.1 | mRNA | downstream | 649131 | 11027269 ~ 11096141 (+) | False | fer |
| TU455483 | other | upstream | 599226 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_003403285.1 | other | upstream | 995732 | 9371459 ~ 9371530 (+) | True | LOC113531683 |
| XR_003403274.1 | other | upstream | 996125 | 9371060 ~ 9371137 (+) | True | LOC113531672 |
| XR_003403289.1 | other | upstream | 997934 | 9369261 ~ 9369328 (+) | True | LOC113531687 |
| XR_003403288.1 | other | upstream | 998359 | 9368831 ~ 9368903 (+) | True | LOC113531686 |
| TU455978 | other | downstream | 75 | 10378213 ~ 10379665 (+) | True | G384593 |
| XR_003403209.2 | other | downstream | 919842 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU457909 | other | downstream | 3443650 | 13821788 ~ 13824055 (+) | True | G386294 |
| TU457943 | other | downstream | 3447712 | 13825850 ~ 13828148 (+) | True | G386325 |
| XR_004577401.1 | other | downstream | 4983220 | 15361358 ~ 15367247 (+) | True | fkbp6 |
