Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403219.2 |
| length | 502 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | LOC113531091 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 11130876 ~ 11131867 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577443.1 | lncRNA | upstream | 2991 | 11126383 ~ 11127885 (+) | True | LOC117596264 |
| TU456400 | lncRNA | upstream | 14294 | 11116378 ~ 11116582 (+) | True | G384973 |
| TU456323 | lncRNA | upstream | 32941 | 11096842 ~ 11097935 (+) | True | G384906 |
| TU456303 | lncRNA | upstream | 193475 | 10922884 ~ 10937401 (+) | True | G384887 |
| TU456279 | lncRNA | upstream | 345942 | 10784701 ~ 10784934 (+) | True | G384868 |
| TU456405 | lncRNA | downstream | 12876 | 11144743 ~ 11145027 (+) | True | G384977 |
| TU456419 | lncRNA | downstream | 153459 | 11285326 ~ 11285765 (+) | True | G384989 |
| TU456412 | lncRNA | downstream | 166107 | 11297974 ~ 11311011 (+) | False | ajm1 |
| XR_004577453.1 | lncRNA | downstream | 198866 | 11330733 ~ 11344595 (+) | True | LOC117596271 |
| TU456445 | lncRNA | downstream | 215735 | 11347602 ~ 11347816 (+) | True | G385014 |
| XM_034300946.1 | mRNA | upstream | 34735 | 11025868 ~ 11096141 (+) | False | fer |
| XM_026922116.2 | mRNA | downstream | 87191 | 11219058 ~ 11274500 (+) | False | mapkap1 |
| XM_026922115.2 | mRNA | downstream | 88065 | 11219932 ~ 11276976 (+) | False | mapkap1 |
| XM_026922117.2 | mRNA | downstream | 105020 | 11236887 ~ 11276976 (+) | True | mapkap1 |
| XM_026921450.2 | mRNA | downstream | 166113 | 11297980 ~ 11326055 (+) | True | ajm1 |
| XM_026921453.2 | mRNA | downstream | 166113 | 11297980 ~ 11326055 (+) | False | ajm1 |
| TU455978 | other | upstream | 751211 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 1362840 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_003403285.1 | other | upstream | 1759346 | 9371459 ~ 9371530 (+) | True | LOC113531683 |
| XR_003403274.1 | other | upstream | 1759739 | 9371060 ~ 9371137 (+) | True | LOC113531672 |
| XR_003403289.1 | other | upstream | 1761548 | 9369261 ~ 9369328 (+) | True | LOC113531687 |
| XR_003403209.2 | other | downstream | 166113 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU457909 | other | downstream | 2689921 | 13821788 ~ 13824055 (+) | True | G386294 |
| TU457943 | other | downstream | 2693983 | 13825850 ~ 13828148 (+) | True | G386325 |
| XR_004577401.1 | other | downstream | 4229491 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 4902956 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
