Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU100815 |
| length | 589 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G84881 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 18131410 ~ 18131998 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU100258 | lncRNA | downstream | 297821 | 17833375 ~ 17833589 (-) | True | G84411 |
| TU100243 | lncRNA | downstream | 387385 | 17740639 ~ 17744025 (-) | True | LOC117597384 |
| XR_004578231.1 | lncRNA | downstream | 387390 | 17740637 ~ 17744020 (-) | False | LOC117597384 |
| TU100224 | lncRNA | downstream | 403413 | 17726653 ~ 17727997 (-) | True | G84394 |
| TU100221 | lncRNA | downstream | 434324 | 17695290 ~ 17697086 (-) | False | evx2 |
| TU100814 | lncRNA | upstream | 1404 | 18133402 ~ 18133689 (-) | True | G84880 |
| TU100816 | lncRNA | upstream | 2838 | 18134836 ~ 18135614 (-) | True | G84882 |
| TU100817 | lncRNA | upstream | 3671 | 18135669 ~ 18137083 (-) | True | G84883 |
| TU100942 | lncRNA | upstream | 408355 | 18540353 ~ 18555865 (-) | True | G84975 |
| TU101041 | lncRNA | upstream | 535993 | 18667991 ~ 18668211 (-) | True | G85069 |
| XM_034304710.1 | mRNA | downstream | 17005 | 18088623 ~ 18114405 (-) | False | LOC113525937 |
| XM_026912613.2 | mRNA | downstream | 17938 | 18088623 ~ 18113472 (-) | True | LOC113525937 |
| XM_026912614.2 | mRNA | downstream | 17938 | 18088623 ~ 18113472 (-) | False | LOC113525937 |
| XM_026912615.2 | mRNA | downstream | 17939 | 18088623 ~ 18113471 (-) | False | LOC113525937 |
| XM_026913233.2 | mRNA | downstream | 46539 | 18082115 ~ 18084871 (-) | True | LOC113526302 |
| XM_026912870.2 | mRNA | upstream | 14408 | 18146406 ~ 18161642 (-) | True | stk24a |
| XM_026912589.2 | mRNA | upstream | 31182 | 18163180 ~ 18174048 (-) | True | slc15a1a |
| XM_026912590.2 | mRNA | upstream | 31720 | 18163718 ~ 18174048 (-) | False | slc15a1a |
| XM_026912585.2 | mRNA | upstream | 42998 | 18174996 ~ 18258223 (-) | True | zmp:0000001200 |
| XM_026912587.2 | mRNA | upstream | 42998 | 18174996 ~ 18258222 (-) | False | zmp:0000001200 |
| TU99754 | other | downstream | 1091567 | 17028307 ~ 17039843 (-) | False | mettl8 |
| TU99188 | other | downstream | 1910544 | 16219964 ~ 16220866 (-) | True | G83554 |
| TU98290 | other | downstream | 3054215 | 15063425 ~ 15077195 (-) | False | dcaf6 |
| TU98227 | other | downstream | 3294017 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98093 | other | downstream | 3577951 | 14552451 ~ 14553459 (-) | False | med14 |
| TU101475 | other | upstream | 1349122 | 19481120 ~ 19487739 (-) | True | grb14 |
| TU101560 | other | upstream | 1436753 | 19568751 ~ 19573463 (-) | False | steap3 |
| TU101958 | other | upstream | 2094730 | 20226728 ~ 20237615 (-) | True | G85848 |
| XR_004578271.1 | other | upstream | 3004048 | 21136046 ~ 21144621 (-) | False | phgdh |
| XR_004578270.1 | other | upstream | 3004048 | 21136046 ~ 21144621 (-) | True | phgdh |
