Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU90785 |
| length | 1139 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G76462 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 2965266 ~ 2966533 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90778 | lncRNA | downstream | 28832 | 2936081 ~ 2936563 (-) | True | G76455 |
| TU90707 | lncRNA | downstream | 48348 | 2914400 ~ 2917047 (-) | True | G76400 |
| XR_004578280.1 | lncRNA | downstream | 68191 | 2893376 ~ 2897204 (-) | True | LOC117597440 |
| TU90615 | lncRNA | downstream | 211589 | 2684516 ~ 2753806 (-) | False | ifngr2 |
| TU90626 | lncRNA | downstream | 406243 | 2556506 ~ 2559152 (-) | True | G76325 |
| TU90910 | lncRNA | upstream | 626285 | 3592818 ~ 3595411 (-) | True | G76570 |
| TU90968 | lncRNA | upstream | 820423 | 3786956 ~ 3805597 (-) | False | faima |
| TU90966 | lncRNA | upstream | 842659 | 3809192 ~ 3816036 (-) | True | faima |
| TU91019 | lncRNA | upstream | 884863 | 3851396 ~ 3852207 (-) | True | G76658 |
| TU91051 | lncRNA | upstream | 971261 | 3937794 ~ 3938000 (-) | True | G76682 |
| XM_026932051.2 | mRNA | downstream | 5029 | 2944274 ~ 2960366 (-) | True | cavin2a |
| XM_026939466.2 | mRNA | downstream | 11594 | 2928821 ~ 2953801 (-) | True | nabp1a |
| XM_026937158.2 | mRNA | downstream | 45388 | 2919306 ~ 2920007 (-) | True | c5h2orf69 |
| XM_034304223.1 | mRNA | downstream | 135574 | 2823816 ~ 2829821 (-) | False | tyw5 |
| XM_034304728.1 | mRNA | upstream | 2147 | 2968680 ~ 3060237 (-) | True | tmeff2a |
| XM_034304802.1 | mRNA | upstream | 667459 | 3633992 ~ 3745380 (-) | True | dnah7 |
| XM_034304801.1 | mRNA | upstream | 668056 | 3634589 ~ 3745382 (-) | False | dnah7 |
| XM_034304799.1 | mRNA | upstream | 668056 | 3634589 ~ 3745356 (-) | False | dnah7 |
| XM_026934130.2 | mRNA | upstream | 803701 | 3770234 ~ 3784393 (-) | False | parp14rs1 |
| trnas-cga | other | downstream | 25993 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| XR_004578243.1 | other | downstream | 159532 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| XR_004578242.1 | other | downstream | 159532 | 2804548 ~ 2805863 (-) | False | LOC113541352 |
| TU90190 | other | downstream | 916010 | 2049023 ~ 2049385 (-) | False | LOC113547075 |
| TU90050 | other | downstream | 1161750 | 1797982 ~ 1803645 (-) | True | G75893 |
| TU90967 | other | upstream | 846946 | 3813479 ~ 3816036 (-) | False | faima |
| TU91765 | other | upstream | 1873427 | 4839960 ~ 4844879 (-) | True | G77283 |
| TU92001 | other | upstream | 2365051 | 5331584 ~ 5339633 (-) | False | LOC113534947 |
| XR_004578179.1 | other | upstream | 3356620 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
| TU92645 | other | upstream | 3562513 | 6529046 ~ 6564571 (-) | False | G78058 |
