Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU96415 |
| length | 355 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G81222 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 12051418 ~ 12051772 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU96414 | lncRNA | downstream | 764 | 12050367 ~ 12050654 (-) | True | G81221 |
| TU96413 | lncRNA | downstream | 5943 | 12041634 ~ 12045475 (-) | True | G81220 |
| TU96345 | lncRNA | downstream | 194151 | 11844876 ~ 11857267 (-) | True | LOC117597344 |
| XR_004578180.1 | lncRNA | downstream | 194304 | 11847118 ~ 11857114 (-) | False | LOC117597344 |
| TU96223 | lncRNA | downstream | 287699 | 11760490 ~ 11763719 (-) | False | LOC113526311 |
| TU96436 | lncRNA | upstream | 63335 | 12115107 ~ 12115359 (-) | True | G81243 |
| XR_003404757.2 | lncRNA | upstream | 156237 | 12208009 ~ 12210224 (-) | True | LOC113546902 |
| TU96617 | lncRNA | upstream | 244575 | 12296347 ~ 12296635 (-) | True | G81413 |
| TU96731 | lncRNA | upstream | 382595 | 12434367 ~ 12434572 (-) | True | G81520 |
| TU96773 | lncRNA | upstream | 430907 | 12482679 ~ 12507688 (-) | False | irs2b |
| XM_026912464.2 | mRNA | downstream | 1717 | 12015445 ~ 12049701 (-) | True | st6gal2a |
| XM_026912597.2 | mRNA | downstream | 55752 | 11966494 ~ 11995666 (-) | False | uxs1 |
| XM_034304859.1 | mRNA | downstream | 55752 | 11966494 ~ 11995666 (-) | False | uxs1 |
| XM_034304858.1 | mRNA | downstream | 55752 | 11966494 ~ 11995666 (-) | True | uxs1 |
| XM_026912621.2 | mRNA | downstream | 156338 | 11887868 ~ 11895080 (-) | True | fhl2a |
| XM_026912569.2 | mRNA | upstream | 33343 | 12085115 ~ 12088620 (-) | True | pdzk1 |
| XM_026912570.2 | mRNA | upstream | 33913 | 12085685 ~ 12090514 (-) | False | pdzk1 |
| XM_026910761.2 | mRNA | upstream | 430889 | 12482661 ~ 12496451 (-) | True | irs2b |
| XM_026910153.2 | mRNA | upstream | 492007 | 12543779 ~ 12589550 (-) | True | col4a1 |
| XM_026912674.2 | mRNA | upstream | 605281 | 12657053 ~ 12661141 (-) | True | LOC113525968 |
| TU95687 | other | downstream | 1015857 | 11018279 ~ 11035561 (-) | True | G80656 |
| TU95628 | other | downstream | 1080261 | 10969417 ~ 10971157 (-) | True | G80600 |
| TU95376 | other | downstream | 1442376 | 10608313 ~ 10609042 (-) | False | LOC113526229 |
| TU94731 | other | downstream | 2396963 | 9653794 ~ 9654455 (-) | False | si:dkey-83m22.7 |
| TU94755 | other | downstream | 2482298 | 9568555 ~ 9569120 (-) | True | G79826 |
| TU96948 | other | upstream | 661427 | 12713199 ~ 12728025 (-) | False | hspbap1 |
| TU96950 | other | upstream | 661427 | 12713199 ~ 12716669 (-) | False | hspbap1 |
| TU98093 | other | upstream | 2500679 | 14552451 ~ 14553459 (-) | False | med14 |
| TU98227 | other | upstream | 2776014 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98290 | other | upstream | 3011653 | 15063425 ~ 15077195 (-) | False | dcaf6 |
