Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU96858 |
| length | 244 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G81634 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 12700250 ~ 12700493 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU96832 | lncRNA | downstream | 44388 | 12654336 ~ 12655862 (-) | True | G81612 |
| TU96773 | lncRNA | downstream | 192562 | 12482679 ~ 12507688 (-) | False | irs2b |
| TU96731 | lncRNA | downstream | 265678 | 12434367 ~ 12434572 (-) | True | G81520 |
| TU96617 | lncRNA | downstream | 403615 | 12296347 ~ 12296635 (-) | True | G81413 |
| XR_003404757.2 | lncRNA | downstream | 490026 | 12208009 ~ 12210224 (-) | True | LOC113546902 |
| TU97040 | lncRNA | upstream | 220423 | 12920916 ~ 12923093 (-) | True | G81802 |
| TU97184 | lncRNA | upstream | 396216 | 13096709 ~ 13099204 (-) | True | G81932 |
| TU97263 | lncRNA | upstream | 514877 | 13215370 ~ 13250509 (-) | False | gli2a |
| XR_004578245.1 | lncRNA | upstream | 577407 | 13277900 ~ 13282536 (-) | True | LOC117597411 |
| TU97281 | lncRNA | upstream | 598965 | 13299458 ~ 13300403 (-) | True | G81995 |
| XM_026912674.2 | mRNA | downstream | 39109 | 12657053 ~ 12661141 (-) | True | LOC113525968 |
| XM_026910153.2 | mRNA | downstream | 110700 | 12543779 ~ 12589550 (-) | True | col4a1 |
| XM_026910761.2 | mRNA | downstream | 203799 | 12482661 ~ 12496451 (-) | True | irs2b |
| XM_026912570.2 | mRNA | downstream | 609736 | 12085685 ~ 12090514 (-) | False | pdzk1 |
| XM_026912569.2 | mRNA | downstream | 611630 | 12085115 ~ 12088620 (-) | True | pdzk1 |
| XM_034304681.1 | mRNA | upstream | 12572 | 12713065 ~ 12728037 (-) | False | hspbap1 |
| XM_026912186.2 | mRNA | upstream | 12572 | 12713065 ~ 12728037 (-) | True | hspbap1 |
| XM_026911676.2 | mRNA | upstream | 75733 | 12776226 ~ 12873123 (-) | False | sema5ba |
| XM_026911691.2 | mRNA | upstream | 75733 | 12776226 ~ 12873123 (-) | True | sema5ba |
| XM_026911685.2 | mRNA | upstream | 75733 | 12776226 ~ 12873123 (-) | False | sema5ba |
| TU95687 | other | downstream | 1664689 | 11018279 ~ 11035561 (-) | True | G80656 |
| TU95628 | other | downstream | 1729093 | 10969417 ~ 10971157 (-) | True | G80600 |
| TU95376 | other | downstream | 2091208 | 10608313 ~ 10609042 (-) | False | LOC113526229 |
| TU94731 | other | downstream | 3045795 | 9653794 ~ 9654455 (-) | False | si:dkey-83m22.7 |
| TU94755 | other | downstream | 3131130 | 9568555 ~ 9569120 (-) | True | G79826 |
| TU96948 | other | upstream | 12706 | 12713199 ~ 12728025 (-) | False | hspbap1 |
| TU96950 | other | upstream | 12706 | 12713199 ~ 12716669 (-) | False | hspbap1 |
| TU98093 | other | upstream | 1851958 | 14552451 ~ 14553459 (-) | False | med14 |
| TU98227 | other | upstream | 2127293 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98290 | other | upstream | 2362932 | 15063425 ~ 15077195 (-) | False | dcaf6 |
