Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU98939 |
| length | 212 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 3 |
| gene id | pou1f1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 15943740 ~ 15973914 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98926 | lncRNA | downstream | 444 | 15943740 ~ 15968374 (-) | False | pou1f1 |
| TU98904 | lncRNA | downstream | 28762 | 15939499 ~ 15940056 (-) | True | G83309 |
| TU98901 | lncRNA | downstream | 28762 | 15939599 ~ 15940056 (-) | False | G83309 |
| XR_003402738.2 | lncRNA | downstream | 45609 | 15920967 ~ 15923209 (-) | False | LOC113526197 |
| TU98894 | lncRNA | downstream | 45639 | 15920825 ~ 15923179 (-) | True | LOC113526197 |
| TU99071 | lncRNA | upstream | 40610 | 16009956 ~ 16012207 (-) | True | G83446 |
| TU99081 | lncRNA | upstream | 56036 | 16025382 ~ 16026189 (-) | True | G83456 |
| TU99082 | lncRNA | upstream | 61188 | 16030534 ~ 16030743 (-) | True | G83457 |
| TU99102 | lncRNA | upstream | 103051 | 16072397 ~ 16072684 (-) | True | G83473 |
| TU99103 | lncRNA | upstream | 103494 | 16072840 ~ 16073071 (-) | True | G83474 |
| XM_026912773.2 | mRNA | downstream | 20477 | 15945570 ~ 15948341 (-) | True | vgll3 |
| XM_026909849.2 | mRNA | downstream | 60387 | 15906927 ~ 15908431 (-) | True | kctd4 |
| XM_026911892.2 | mRNA | downstream | 75846 | 15864043 ~ 15892972 (-) | True | tsc22d1 |
| XM_026911899.2 | mRNA | downstream | 98594 | 15864043 ~ 15870224 (-) | False | tsc22d1 |
| XM_026911906.2 | mRNA | downstream | 101395 | 15864043 ~ 15867423 (-) | False | tsc22d1 |
| XM_026911637.2 | mRNA | upstream | 30331 | 15999677 ~ 16009824 (-) | False | zgc:152951 |
| XM_026911632.2 | mRNA | upstream | 30331 | 15999677 ~ 16009824 (-) | True | zgc:152951 |
| XM_026911620.2 | mRNA | upstream | 46843 | 16016189 ~ 16024344 (-) | False | acod1 |
| XM_034304534.1 | mRNA | upstream | 46843 | 16016189 ~ 16024342 (-) | False | acod1 |
| XM_034304533.1 | mRNA | upstream | 46843 | 16016189 ~ 16024342 (-) | True | acod1 |
| TU98290 | other | downstream | 891623 | 15063425 ~ 15077195 (-) | False | dcaf6 |
| TU98227 | other | downstream | 1131425 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98093 | other | downstream | 1415359 | 14552451 ~ 14553459 (-) | False | med14 |
| TU96948 | other | downstream | 3240793 | 12713199 ~ 12728025 (-) | False | hspbap1 |
| TU99188 | other | upstream | 250618 | 16219964 ~ 16220866 (-) | True | G83554 |
| TU99754 | other | upstream | 1058961 | 17028307 ~ 17039843 (-) | False | mettl8 |
| TU101475 | other | upstream | 3511774 | 19481120 ~ 19487739 (-) | True | grb14 |
| TU101560 | other | upstream | 3599405 | 19568751 ~ 19573463 (-) | False | steap3 |
| TU101958 | other | upstream | 4257382 | 20226728 ~ 20237615 (-) | True | G85848 |
