Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU99081 |
| length | 808 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G83456 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 16025382 ~ 16026189 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU99071 | lncRNA | downstream | 13175 | 16009956 ~ 16012207 (-) | True | G83446 |
| TU98939 | lncRNA | downstream | 56036 | 15968818 ~ 15969346 (-) | False | pou1f1 |
| TU98926 | lncRNA | downstream | 57008 | 15943740 ~ 15968374 (-) | False | pou1f1 |
| TU98904 | lncRNA | downstream | 85326 | 15939499 ~ 15940056 (-) | True | G83309 |
| TU98901 | lncRNA | downstream | 85326 | 15939599 ~ 15940056 (-) | False | G83309 |
| TU99082 | lncRNA | upstream | 4345 | 16030534 ~ 16030743 (-) | True | G83457 |
| TU99102 | lncRNA | upstream | 46208 | 16072397 ~ 16072684 (-) | True | G83473 |
| TU99103 | lncRNA | upstream | 46651 | 16072840 ~ 16073071 (-) | True | G83474 |
| TU99098 | lncRNA | upstream | 48310 | 16074499 ~ 16076620 (-) | False | lmo7a |
| XR_004578163.1 | lncRNA | upstream | 198152 | 16224341 ~ 16228437 (-) | True | LOC117597324 |
| XM_026911620.2 | mRNA | downstream | 1038 | 16016189 ~ 16024344 (-) | False | acod1 |
| XM_034304534.1 | mRNA | downstream | 1040 | 16016189 ~ 16024342 (-) | False | acod1 |
| XM_034304533.1 | mRNA | downstream | 1040 | 16016189 ~ 16024342 (-) | True | acod1 |
| XM_034304535.1 | mRNA | downstream | 1371 | 16016189 ~ 16024011 (-) | False | acod1 |
| XM_034304532.1 | mRNA | downstream | 1371 | 16016189 ~ 16024011 (-) | False | acod1 |
| XM_034304336.1 | mRNA | upstream | 17094 | 16043283 ~ 16076389 (-) | False | lmo7a |
| XM_034304342.1 | mRNA | upstream | 17094 | 16043283 ~ 16076212 (-) | False | lmo7a |
| XM_034304341.1 | mRNA | upstream | 17094 | 16043283 ~ 16076212 (-) | False | lmo7a |
| XM_026912759.2 | mRNA | upstream | 17094 | 16043283 ~ 16076209 (-) | False | lmo7a |
| XM_034304340.1 | mRNA | upstream | 17094 | 16043283 ~ 16076209 (-) | False | lmo7a |
| TU98290 | other | downstream | 948187 | 15063425 ~ 15077195 (-) | False | dcaf6 |
| TU98227 | other | downstream | 1187989 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98093 | other | downstream | 1471923 | 14552451 ~ 14553459 (-) | False | med14 |
| TU96948 | other | downstream | 3297357 | 12713199 ~ 12728025 (-) | False | hspbap1 |
| TU99188 | other | upstream | 193775 | 16219964 ~ 16220866 (-) | True | G83554 |
| TU99754 | other | upstream | 1002118 | 17028307 ~ 17039843 (-) | False | mettl8 |
| TU101475 | other | upstream | 3454931 | 19481120 ~ 19487739 (-) | True | grb14 |
| TU101560 | other | upstream | 3542562 | 19568751 ~ 19573463 (-) | False | steap3 |
| TU101958 | other | upstream | 4200539 | 20226728 ~ 20237615 (-) | True | G85848 |
