Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU99960 |
| length | 1122 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 3 |
| gene id | G84189 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 17332492 ~ 17346350 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU99953 | lncRNA | downstream | 7614 | 17324045 ~ 17324878 (-) | True | G84182 |
| TU99946 | lncRNA | downstream | 20537 | 17307569 ~ 17311955 (-) | True | G84177 |
| TU99803 | lncRNA | downstream | 203812 | 17127310 ~ 17128680 (-) | True | G84061 |
| TU99680 | lncRNA | downstream | 366319 | 16965511 ~ 16966173 (-) | True | G83953 |
| TU99271 | lncRNA | downstream | 922599 | 16409428 ~ 16409893 (-) | True | G83614 |
| TU99971 | lncRNA | upstream | 25629 | 17371979 ~ 17373212 (-) | False | sp3a |
| TU99968 | lncRNA | upstream | 25727 | 17372077 ~ 17373212 (-) | False | sp3a |
| TU99969 | lncRNA | upstream | 25828 | 17372178 ~ 17373212 (-) | False | sp3a |
| TU99970 | lncRNA | upstream | 25972 | 17372322 ~ 17373212 (-) | False | sp3a |
| TU100005 | lncRNA | upstream | 45334 | 17391684 ~ 17391947 (-) | True | G84227 |
| XM_026912996.2 | mRNA | downstream | 82660 | 17216721 ~ 17249832 (-) | True | ppp1r9ala |
| XM_034304897.1 | mRNA | downstream | 82660 | 17218007 ~ 17249832 (-) | False | ppp1r9ala |
| XM_026912998.2 | mRNA | downstream | 82661 | 17216721 ~ 17249831 (-) | False | ppp1r9ala |
| XM_026912997.2 | mRNA | downstream | 82661 | 17216721 ~ 17249831 (-) | False | ppp1r9ala |
| XM_026913163.2 | mRNA | downstream | 122699 | 17176681 ~ 17209793 (-) | False | dync1i2a |
| XM_026912831.2 | mRNA | upstream | 25708 | 17372058 ~ 17381172 (-) | False | sp3a |
| XM_034304695.1 | mRNA | upstream | 25708 | 17372058 ~ 17381171 (-) | False | sp3a |
| XM_026912829.2 | mRNA | upstream | 25708 | 17372058 ~ 17381171 (-) | True | sp3a |
| XM_026912830.2 | mRNA | upstream | 25708 | 17372058 ~ 17381170 (-) | False | sp3a |
| XM_026913145.2 | mRNA | upstream | 90808 | 17437158 ~ 17443522 (-) | True | cir1 |
| TU99754 | other | downstream | 292649 | 17028307 ~ 17039843 (-) | False | mettl8 |
| TU99188 | other | downstream | 1111626 | 16219964 ~ 16220866 (-) | True | G83554 |
| TU98290 | other | downstream | 2255297 | 15063425 ~ 15077195 (-) | False | dcaf6 |
| TU98227 | other | downstream | 2495099 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98093 | other | downstream | 2779033 | 14552451 ~ 14553459 (-) | False | med14 |
| TU101475 | other | upstream | 2134770 | 19481120 ~ 19487739 (-) | True | grb14 |
| TU101560 | other | upstream | 2222401 | 19568751 ~ 19573463 (-) | False | steap3 |
| TU101958 | other | upstream | 2880378 | 20226728 ~ 20237615 (-) | True | G85848 |
| XR_004578271.1 | other | upstream | 3789696 | 21136046 ~ 21144621 (-) | False | phgdh |
| XR_004578270.1 | other | upstream | 3789696 | 21136046 ~ 21144621 (-) | True | phgdh |
