Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578163.1 |
| length | 551 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC117597324 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 16224341 ~ 16228437 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU99098 | lncRNA | downstream | 147721 | 16074499 ~ 16076620 (-) | False | lmo7a |
| TU99103 | lncRNA | downstream | 151270 | 16072840 ~ 16073071 (-) | True | G83474 |
| TU99102 | lncRNA | downstream | 151657 | 16072397 ~ 16072684 (-) | True | G83473 |
| TU99082 | lncRNA | downstream | 193598 | 16030534 ~ 16030743 (-) | True | G83457 |
| TU99081 | lncRNA | downstream | 198152 | 16025382 ~ 16026189 (-) | True | G83456 |
| TU99247 | lncRNA | upstream | 146148 | 16374585 ~ 16376286 (-) | False | si:dkey-91i10.2 |
| TU99271 | lncRNA | upstream | 180991 | 16409428 ~ 16409893 (-) | True | G83614 |
| TU99680 | lncRNA | upstream | 737074 | 16965511 ~ 16966173 (-) | True | G83953 |
| TU99803 | lncRNA | upstream | 898873 | 17127310 ~ 17128680 (-) | True | G84061 |
| TU99946 | lncRNA | upstream | 1079132 | 17307569 ~ 17311955 (-) | True | G84177 |
| XM_026912661.1 | mRNA | downstream | 124789 | 16098753 ~ 16099552 (-) | True | LOC113525961 |
| XM_026912662.1 | mRNA | downstream | 124789 | 16098753 ~ 16099552 (-) | False | LOC113525961 |
| XM_034304708.1 | mRNA | downstream | 139273 | 16079562 ~ 16085068 (-) | False | uchl3 |
| XM_026947885.2 | mRNA | downstream | 139278 | 16079562 ~ 16085063 (-) | True | uchl3 |
| XM_034304336.1 | mRNA | downstream | 147952 | 16043283 ~ 16076389 (-) | False | lmo7a |
| XM_026911595.2 | mRNA | upstream | 65455 | 16293892 ~ 16349242 (-) | False | neb |
| XM_026911579.2 | mRNA | upstream | 65455 | 16293892 ~ 16349242 (-) | False | neb |
| XM_026911566.2 | mRNA | upstream | 65455 | 16293892 ~ 16349242 (-) | False | neb |
| XM_026911572.2 | mRNA | upstream | 65455 | 16293892 ~ 16349242 (-) | False | neb |
| XM_026911559.2 | mRNA | upstream | 65455 | 16293892 ~ 16349242 (-) | False | neb |
| TU99188 | other | downstream | 3475 | 16219964 ~ 16220866 (-) | True | G83554 |
| TU98290 | other | downstream | 1147146 | 15063425 ~ 15077195 (-) | False | dcaf6 |
| TU98227 | other | downstream | 1386948 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98093 | other | downstream | 1670882 | 14552451 ~ 14553459 (-) | False | med14 |
| TU96948 | other | downstream | 3496316 | 12713199 ~ 12728025 (-) | False | hspbap1 |
| TU99754 | other | upstream | 799870 | 17028307 ~ 17039843 (-) | False | mettl8 |
| TU101475 | other | upstream | 3252683 | 19481120 ~ 19487739 (-) | True | grb14 |
| TU101560 | other | upstream | 3340314 | 19568751 ~ 19573463 (-) | False | steap3 |
| TU101958 | other | upstream | 3998291 | 20226728 ~ 20237615 (-) | True | G85848 |
| XR_004578271.1 | other | upstream | 4907609 | 21136046 ~ 21144621 (-) | False | phgdh |
