Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnas-cga |
| length | 82 |
| RNA type | tRNA |
| GC content | 0.57 |
| exon number | 1 |
| gene id | trnas-cga |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 2939321 ~ 2939402 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90778 | lncRNA | downstream | 2758 | 2936081 ~ 2936563 (-) | True | G76455 |
| TU90707 | lncRNA | downstream | 22274 | 2914400 ~ 2917047 (-) | True | G76400 |
| XR_004578280.1 | lncRNA | downstream | 42117 | 2893376 ~ 2897204 (-) | True | LOC117597440 |
| TU90615 | lncRNA | downstream | 185515 | 2684516 ~ 2753806 (-) | False | ifngr2 |
| TU90626 | lncRNA | downstream | 380169 | 2556506 ~ 2559152 (-) | True | G76325 |
| TU90786 | lncRNA | upstream | 25864 | 2965266 ~ 2966533 (-) | True | G76462 |
| TU90785 | lncRNA | upstream | 25993 | 2965395 ~ 2966533 (-) | False | G76462 |
| TU90910 | lncRNA | upstream | 653416 | 3592818 ~ 3595411 (-) | True | G76570 |
| TU90968 | lncRNA | upstream | 847554 | 3786956 ~ 3805597 (-) | False | faima |
| TU90966 | lncRNA | upstream | 869790 | 3809192 ~ 3816036 (-) | True | faima |
| XM_026937158.2 | mRNA | downstream | 19314 | 2919306 ~ 2920007 (-) | True | c5h2orf69 |
| XM_034304223.1 | mRNA | downstream | 109500 | 2823816 ~ 2829821 (-) | False | tyw5 |
| XM_026942700.2 | mRNA | downstream | 109756 | 2823816 ~ 2829565 (-) | True | tyw5 |
| XM_026938295.2 | mRNA | downstream | 133465 | 2801006 ~ 2805856 (-) | False | LOC113541352 |
| XM_026938287.2 | mRNA | downstream | 133466 | 2801006 ~ 2805855 (-) | True | LOC113541352 |
| XM_026932051.2 | mRNA | upstream | 4872 | 2944274 ~ 2960366 (-) | True | cavin2a |
| XM_034304728.1 | mRNA | upstream | 29278 | 2968680 ~ 3060237 (-) | True | tmeff2a |
| XM_034304802.1 | mRNA | upstream | 694590 | 3633992 ~ 3745380 (-) | True | dnah7 |
| XM_034304801.1 | mRNA | upstream | 695187 | 3634589 ~ 3745382 (-) | False | dnah7 |
| XM_034304799.1 | mRNA | upstream | 695187 | 3634589 ~ 3745356 (-) | False | dnah7 |
| XR_004578243.1 | other | downstream | 133458 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| XR_004578242.1 | other | downstream | 133458 | 2804548 ~ 2805863 (-) | False | LOC113541352 |
| TU90190 | other | downstream | 889936 | 2049023 ~ 2049385 (-) | False | LOC113547075 |
| TU90050 | other | downstream | 1135676 | 1797982 ~ 1803645 (-) | True | G75893 |
| trnar-ucu_7 | other | downstream | 1264748 | 1674484 ~ 1674573 (-) | True | trnar-ucu_7 |
| TU90967 | other | upstream | 874077 | 3813479 ~ 3816036 (-) | False | faima |
| TU91765 | other | upstream | 1900558 | 4839960 ~ 4844879 (-) | True | G77283 |
| TU92001 | other | upstream | 2392182 | 5331584 ~ 5339633 (-) | False | LOC113534947 |
| XR_004578179.1 | other | upstream | 3383751 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
| TU92645 | other | upstream | 3589644 | 6529046 ~ 6564571 (-) | False | G78058 |
