Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU116922 |
| length | 323 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G98607 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 12838220 ~ 12838542 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU116902 | lncRNA | downstream | 34612 | 12802798 ~ 12803608 (-) | True | G98588 |
| TU116852 | lncRNA | downstream | 64013 | 12763899 ~ 12774207 (-) | True | G98552 |
| TU116862 | lncRNA | downstream | 64013 | 12773138 ~ 12774207 (-) | False | G98552 |
| TU116850 | lncRNA | downstream | 72939 | 12763899 ~ 12765281 (-) | False | G98552 |
| TU116875 | lncRNA | downstream | 95996 | 12738949 ~ 12742224 (-) | True | G98563 |
| TU117108 | lncRNA | upstream | 188916 | 13027458 ~ 13028597 (-) | True | G98767 |
| TU117117 | lncRNA | upstream | 290658 | 13129200 ~ 13135173 (-) | True | G98776 |
| TU117133 | lncRNA | upstream | 343801 | 13182343 ~ 13182550 (-) | True | G98790 |
| XR_004578307.1 | lncRNA | upstream | 472853 | 13311395 ~ 13312346 (-) | True | LOC117597528 |
| TU117412 | lncRNA | upstream | 472863 | 13311405 ~ 13318008 (-) | False | LOC117597528 |
| XM_034305441.1 | mRNA | downstream | 75581 | 12748014 ~ 12762639 (-) | False | bbs2 |
| XM_034305442.1 | mRNA | downstream | 75607 | 12748014 ~ 12762613 (-) | False | bbs2 |
| XM_026927623.2 | mRNA | downstream | 75720 | 12748014 ~ 12762500 (-) | True | bbs2 |
| XM_026927265.2 | mRNA | downstream | 92593 | 12742353 ~ 12745627 (-) | True | b3gnt9 |
| XM_026927470.2 | mRNA | downstream | 113693 | 12721746 ~ 12724527 (-) | True | foxl1 |
| XM_026927457.2 | mRNA | upstream | 65491 | 12904033 ~ 12914246 (-) | False | psme3ip1 |
| XM_026927455.2 | mRNA | upstream | 65491 | 12904033 ~ 12914245 (-) | True | psme3ip1 |
| XM_026927456.2 | mRNA | upstream | 65491 | 12904033 ~ 12914243 (-) | False | psme3ip1 |
| XM_034305429.1 | mRNA | upstream | 65491 | 12904033 ~ 12914182 (-) | False | psme3ip1 |
| XM_026927394.2 | mRNA | upstream | 110045 | 12948587 ~ 12984639 (-) | True | si:ch211-212o1.2 |
| TU116638 | other | downstream | 414242 | 12421102 ~ 12423978 (-) | True | akip1 |
| XR_003403510.2 | other | downstream | 432939 | 12397687 ~ 12405281 (-) | False | znf143b |
| TU116624 | other | downstream | 523695 | 12312082 ~ 12314525 (-) | False | admb |
| XR_004578339.1 | other | downstream | 1227256 | 11588001 ~ 11610964 (-) | False | arntl2 |
| XR_003403495.2 | other | downstream | 2543397 | 10268477 ~ 10294823 (-) | False | ttc38 |
| TU117111 | other | upstream | 207281 | 13045823 ~ 13052311 (-) | True | G98770 |
| XR_003403539.1 | other | upstream | 598359 | 13436901 ~ 13436975 (-) | True | LOC113534846 |
| XR_003403499.2 | other | upstream | 712138 | 13550680 ~ 13562574 (-) | True | c6h15orf39 |
| trnaq-cug_10 | other | upstream | 806867 | 13645409 ~ 13645480 (-) | True | trnaq-cug_10 |
| XR_003403538.1 | other | upstream | 926384 | 13764926 ~ 13765056 (-) | True | LOC113534845 |
