Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU117108 |
| length | 1101 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G98767 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 13027458 ~ 13028597 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU116922 | lncRNA | downstream | 188916 | 12838220 ~ 12838542 (-) | True | G98607 |
| TU116902 | lncRNA | downstream | 223850 | 12802798 ~ 12803608 (-) | True | G98588 |
| TU116852 | lncRNA | downstream | 253251 | 12763899 ~ 12774207 (-) | True | G98552 |
| TU116862 | lncRNA | downstream | 253251 | 12773138 ~ 12774207 (-) | False | G98552 |
| TU116850 | lncRNA | downstream | 262177 | 12763899 ~ 12765281 (-) | False | G98552 |
| TU117117 | lncRNA | upstream | 100603 | 13129200 ~ 13135173 (-) | True | G98776 |
| TU117133 | lncRNA | upstream | 153746 | 13182343 ~ 13182550 (-) | True | G98790 |
| XR_004578307.1 | lncRNA | upstream | 282798 | 13311395 ~ 13312346 (-) | True | LOC117597528 |
| TU117412 | lncRNA | upstream | 282808 | 13311405 ~ 13318008 (-) | False | LOC117597528 |
| TU117519 | lncRNA | upstream | 616978 | 13645575 ~ 13647786 (-) | True | G99118 |
| XM_034305410.1 | mRNA | downstream | 42813 | 12952550 ~ 12984645 (-) | False | si:ch211-212o1.2 |
| XM_026927394.2 | mRNA | downstream | 42819 | 12948587 ~ 12984639 (-) | True | si:ch211-212o1.2 |
| XM_026927457.2 | mRNA | downstream | 113212 | 12904033 ~ 12914246 (-) | False | psme3ip1 |
| XM_026927455.2 | mRNA | downstream | 113213 | 12904033 ~ 12914245 (-) | True | psme3ip1 |
| XM_026927456.2 | mRNA | downstream | 113215 | 12904033 ~ 12914243 (-) | False | psme3ip1 |
| XM_034305370.1 | mRNA | upstream | 346262 | 13374859 ~ 13395693 (-) | True | lonp2 |
| XM_026927072.2 | mRNA | upstream | 369678 | 13398275 ~ 13404730 (-) | False | il34 |
| XM_026927073.2 | mRNA | upstream | 369678 | 13398275 ~ 13404730 (-) | True | il34 |
| XM_026927304.2 | mRNA | upstream | 382763 | 13411360 ~ 13440802 (-) | True | sf3b3 |
| XM_026927145.2 | mRNA | upstream | 446934 | 13475531 ~ 13491284 (-) | True | aars1 |
| TU116638 | other | downstream | 603480 | 12421102 ~ 12423978 (-) | True | akip1 |
| XR_003403510.2 | other | downstream | 622177 | 12397687 ~ 12405281 (-) | False | znf143b |
| TU116624 | other | downstream | 712933 | 12312082 ~ 12314525 (-) | False | admb |
| XR_004578339.1 | other | downstream | 1416494 | 11588001 ~ 11610964 (-) | False | arntl2 |
| XR_003403495.2 | other | downstream | 2732635 | 10268477 ~ 10294823 (-) | False | ttc38 |
| TU117111 | other | upstream | 17226 | 13045823 ~ 13052311 (-) | True | G98770 |
| XR_003403539.1 | other | upstream | 408304 | 13436901 ~ 13436975 (-) | True | LOC113534846 |
| XR_003403499.2 | other | upstream | 522083 | 13550680 ~ 13562574 (-) | True | c6h15orf39 |
| trnaq-cug_10 | other | upstream | 616812 | 13645409 ~ 13645480 (-) | True | trnaq-cug_10 |
| XR_003403538.1 | other | upstream | 736329 | 13764926 ~ 13765056 (-) | True | LOC113534845 |
