Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU117536 |
| length | 227 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G99134 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 13732951 ~ 13768470 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU117519 | lncRNA | downstream | 85165 | 13645575 ~ 13647786 (-) | True | G99118 |
| TU117412 | lncRNA | downstream | 414943 | 13311405 ~ 13318008 (-) | False | LOC117597528 |
| XR_004578307.1 | lncRNA | downstream | 420605 | 13311395 ~ 13312346 (-) | True | LOC117597528 |
| TU117133 | lncRNA | downstream | 550401 | 13182343 ~ 13182550 (-) | True | G98790 |
| TU117117 | lncRNA | downstream | 597778 | 13129200 ~ 13135173 (-) | True | G98776 |
| XR_003403491.2 | lncRNA | upstream | 14305 | 13782775 ~ 13784737 (-) | True | LOC113534347 |
| XR_003403492.2 | lncRNA | upstream | 14305 | 13782775 ~ 13784674 (-) | False | LOC113534347 |
| TU117539 | lncRNA | upstream | 14322 | 13782792 ~ 13784697 (-) | False | LOC113534347 |
| TU117568 | lncRNA | upstream | 74349 | 13842819 ~ 13843229 (-) | True | G99165 |
| TU117569 | lncRNA | upstream | 75529 | 13843999 ~ 13844237 (-) | True | G99166 |
| XM_026927136.2 | mRNA | downstream | 89379 | 13612796 ~ 13643572 (-) | False | dennd4a |
| XM_026927135.2 | mRNA | downstream | 89379 | 13612796 ~ 13643572 (-) | False | dennd4a |
| XM_026927134.2 | mRNA | downstream | 89379 | 13612796 ~ 13643572 (-) | False | dennd4a |
| XM_026927133.2 | mRNA | downstream | 89379 | 13612796 ~ 13643572 (-) | True | dennd4a |
| XM_034305364.1 | mRNA | downstream | 144117 | 13583262 ~ 13588834 (-) | False | ints14 |
| XM_026927442.2 | mRNA | upstream | 17677 | 13786147 ~ 13789542 (-) | True | rpl4 |
| XM_026927651.2 | mRNA | upstream | 29154 | 13797624 ~ 13805174 (-) | True | lctlb |
| XM_034305074.1 | mRNA | upstream | 38514 | 13806984 ~ 13809993 (-) | True | snapc5 |
| XM_026927443.2 | mRNA | upstream | 38514 | 13806984 ~ 13809991 (-) | False | snapc5 |
| XM_026927417.2 | mRNA | upstream | 187963 | 13956433 ~ 13961386 (-) | True | aagab |
| trnaq-cug_10 | other | downstream | 87471 | 13645409 ~ 13645480 (-) | True | trnaq-cug_10 |
| XR_003403499.2 | other | downstream | 170377 | 13550680 ~ 13562574 (-) | True | c6h15orf39 |
| XR_003403539.1 | other | downstream | 295976 | 13436901 ~ 13436975 (-) | True | LOC113534846 |
| TU117111 | other | downstream | 680640 | 13045823 ~ 13052311 (-) | True | G98770 |
| TU116638 | other | downstream | 1308973 | 12421102 ~ 12423978 (-) | True | akip1 |
| XR_003403544.1 | other | upstream | 15085 | 13783555 ~ 13783624 (-) | True | LOC113534852 |
| XR_003403543.1 | other | upstream | 18308 | 13786778 ~ 13786848 (-) | True | LOC113534851 |
| XR_003403542.1 | other | upstream | 18664 | 13787134 ~ 13787202 (-) | True | LOC113534850 |
| XR_003403537.1 | other | upstream | 19187 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_003403534.1 | other | upstream | 19632 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
