Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU117539 |
| length | 566 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 6 |
| gene id | LOC113534347 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 13782775 ~ 13784737 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU117536 | lncRNA | downstream | 14322 | 13732951 ~ 13768470 (-) | True | G99134 |
| TU117519 | lncRNA | downstream | 135006 | 13645575 ~ 13647786 (-) | True | G99118 |
| TU117412 | lncRNA | downstream | 464784 | 13311405 ~ 13318008 (-) | False | LOC117597528 |
| XR_004578307.1 | lncRNA | downstream | 470446 | 13311395 ~ 13312346 (-) | True | LOC117597528 |
| TU117133 | lncRNA | downstream | 600242 | 13182343 ~ 13182550 (-) | True | G98790 |
| TU117568 | lncRNA | upstream | 58122 | 13842819 ~ 13843229 (-) | True | G99165 |
| TU117569 | lncRNA | upstream | 59302 | 13843999 ~ 13844237 (-) | True | G99166 |
| TU117593 | lncRNA | upstream | 147856 | 13932553 ~ 13932934 (-) | True | G99184 |
| TU117597 | lncRNA | upstream | 160054 | 13944751 ~ 13946911 (-) | True | G99188 |
| TU117596 | lncRNA | upstream | 165450 | 13950147 ~ 13950721 (-) | True | G99187 |
| XM_026927092.2 | mRNA | downstream | 19336 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927093.2 | mRNA | downstream | 19336 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927089.2 | mRNA | downstream | 19336 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927090.2 | mRNA | downstream | 19336 | 13652058 ~ 13763456 (-) | True | megf11 |
| XM_026927133.2 | mRNA | downstream | 139220 | 13612796 ~ 13643572 (-) | True | dennd4a |
| XM_026927442.2 | mRNA | upstream | 1450 | 13786147 ~ 13789542 (-) | True | rpl4 |
| XM_026927651.2 | mRNA | upstream | 12927 | 13797624 ~ 13805174 (-) | True | lctlb |
| XM_034305074.1 | mRNA | upstream | 22287 | 13806984 ~ 13809993 (-) | True | snapc5 |
| XM_026927443.2 | mRNA | upstream | 22287 | 13806984 ~ 13809991 (-) | False | snapc5 |
| XM_026927417.2 | mRNA | upstream | 171736 | 13956433 ~ 13961386 (-) | True | aagab |
| XR_003403538.1 | other | downstream | 17736 | 13764926 ~ 13765056 (-) | True | LOC113534845 |
| trnaq-cug_10 | other | downstream | 137312 | 13645409 ~ 13645480 (-) | True | trnaq-cug_10 |
| XR_003403499.2 | other | downstream | 220218 | 13550680 ~ 13562574 (-) | True | c6h15orf39 |
| XR_003403539.1 | other | downstream | 345817 | 13436901 ~ 13436975 (-) | True | LOC113534846 |
| TU117111 | other | downstream | 730481 | 13045823 ~ 13052311 (-) | True | G98770 |
| XR_003403543.1 | other | upstream | 2081 | 13786778 ~ 13786848 (-) | True | LOC113534851 |
| XR_003403542.1 | other | upstream | 2437 | 13787134 ~ 13787202 (-) | True | LOC113534850 |
| XR_003403537.1 | other | upstream | 2960 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_003403534.1 | other | upstream | 3405 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403533.2 | other | upstream | 4054 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
