Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU117973 |
| length | 852 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G99493 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 14648078 ~ 14648993 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU117858 | lncRNA | downstream | 17333 | 14279443 ~ 14630745 (-) | True | G99396 |
| TU117962 | lncRNA | downstream | 44606 | 14601223 ~ 14603472 (-) | True | G99482 |
| TU117933 | lncRNA | downstream | 112068 | 14533820 ~ 14536010 (-) | True | G99453 |
| XR_003403487.2 | lncRNA | downstream | 128294 | 14510924 ~ 14519784 (-) | True | LOC113534271 |
| TU117912 | lncRNA | downstream | 194971 | 14448856 ~ 14453107 (-) | True | G99433 |
| TU118323 | lncRNA | upstream | 500410 | 15149403 ~ 15150315 (-) | True | G99780 |
| TU118318 | lncRNA | upstream | 511210 | 15160203 ~ 15168426 (-) | True | G99775 |
| TU118330 | lncRNA | upstream | 522318 | 15171311 ~ 15173434 (-) | True | G99784 |
| TU118350 | lncRNA | upstream | 527182 | 15176175 ~ 15180912 (-) | True | G99801 |
| TU118481 | lncRNA | upstream | 648612 | 15297605 ~ 15299578 (-) | True | G99915 |
| XM_026927204.2 | mRNA | downstream | 18127 | 14536079 ~ 14629951 (-) | True | igf1ra |
| XM_026927205.2 | mRNA | downstream | 18127 | 14538524 ~ 14629951 (-) | False | igf1ra |
| XM_026927335.2 | mRNA | downstream | 118221 | 14520667 ~ 14529857 (-) | True | synm |
| XM_026927341.2 | mRNA | downstream | 145848 | 14454337 ~ 14502230 (-) | True | cttnbp2 |
| XM_026927342.2 | mRNA | downstream | 145849 | 14454337 ~ 14502229 (-) | False | cttnbp2 |
| XM_026927160.2 | mRNA | upstream | 8977 | 14657970 ~ 14667731 (-) | True | anpepa |
| XM_026927018.2 | mRNA | upstream | 21320 | 14670313 ~ 14673362 (-) | False | si:dkey-12e7.1 |
| XM_034304965.1 | mRNA | upstream | 21320 | 14670313 ~ 14673239 (-) | False | si:dkey-12e7.1 |
| XM_034304963.1 | mRNA | upstream | 21320 | 14670313 ~ 14673239 (-) | False | si:dkey-12e7.1 |
| XM_034304964.1 | mRNA | upstream | 21320 | 14670313 ~ 14673160 (-) | True | si:dkey-12e7.1 |
| XR_003403523.2 | other | downstream | 301070 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 859231 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003403534.1 | other | downstream | 859879 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403537.1 | other | downstream | 860292 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_003403542.1 | other | downstream | 860876 | 13787134 ~ 13787202 (-) | True | LOC113534850 |
| TU118530 | other | upstream | 698173 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_004578368.1 | other | upstream | 3437662 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU119855 | other | upstream | 3538454 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_003402833.1 | other | upstream | 4701769 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 5331076 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
