Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118509 |
| length | 359 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G99941 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 15317509 ~ 15317867 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118481 | lncRNA | downstream | 17931 | 15297605 ~ 15299578 (-) | True | G99915 |
| TU118350 | lncRNA | downstream | 136597 | 15176175 ~ 15180912 (-) | True | G99801 |
| TU118330 | lncRNA | downstream | 144075 | 15171311 ~ 15173434 (-) | True | G99784 |
| TU118318 | lncRNA | downstream | 149083 | 15160203 ~ 15168426 (-) | True | G99775 |
| TU118323 | lncRNA | downstream | 167194 | 15149403 ~ 15150315 (-) | True | G99780 |
| XR_003403500.2 | lncRNA | upstream | 115528 | 15433395 ~ 15436916 (-) | True | LOC113534479 |
| TU118600 | lncRNA | upstream | 159634 | 15477501 ~ 15478166 (-) | True | G100023 |
| TU118605 | lncRNA | upstream | 164962 | 15482829 ~ 15483037 (-) | True | G100027 |
| TU118606 | lncRNA | upstream | 166136 | 15484003 ~ 15484301 (-) | True | G100028 |
| TU118613 | lncRNA | upstream | 228709 | 15546576 ~ 15548763 (-) | True | G100034 |
| XM_026927748.2 | mRNA | downstream | 117261 | 15177211 ~ 15200248 (-) | True | pard6a |
| XM_026927199.2 | mRNA | downstream | 185303 | 15121047 ~ 15132206 (-) | False | tsnaxip1 |
| XM_026927200.2 | mRNA | downstream | 187118 | 15121047 ~ 15130391 (-) | True | tsnaxip1 |
| XM_026927495.2 | mRNA | downstream | 197791 | 15105315 ~ 15119718 (-) | True | nutf2 |
| XM_026927338.2 | mRNA | downstream | 212399 | 15075874 ~ 15105110 (-) | True | edc4 |
| XM_034305486.1 | mRNA | upstream | 30781 | 15348648 ~ 15357563 (-) | False | tmem170a |
| XM_026927032.2 | mRNA | upstream | 30781 | 15348648 ~ 15354663 (-) | False | tmem170a |
| XM_034305488.1 | mRNA | upstream | 30781 | 15348648 ~ 15354192 (-) | False | tmem170a |
| XM_026927033.2 | mRNA | upstream | 30781 | 15348648 ~ 15352739 (-) | False | tmem170a |
| XM_026927538.2 | mRNA | upstream | 153762 | 15471629 ~ 15473015 (-) | True | LOC113534617 |
| XR_003403523.2 | other | downstream | 970501 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 1528662 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003403534.1 | other | downstream | 1529310 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403537.1 | other | downstream | 1529723 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_003403542.1 | other | downstream | 1530307 | 13787134 ~ 13787202 (-) | True | LOC113534850 |
| TU118530 | other | upstream | 29299 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_004578368.1 | other | upstream | 2768788 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU119855 | other | upstream | 2869580 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_003402833.1 | other | upstream | 4032895 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 4662202 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
