Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118884 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G100288 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 16198494 ~ 16198698 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403526.2 | lncRNA | downstream | 64325 | 16088944 ~ 16134169 (-) | True | LOC113534800 |
| TU118768 | lncRNA | downstream | 259165 | 15939123 ~ 15939329 (-) | True | G100179 |
| TU118743 | lncRNA | downstream | 334715 | 15863580 ~ 15863779 (-) | True | G100154 |
| XR_004578378.1 | lncRNA | downstream | 472137 | 15690281 ~ 15726357 (-) | True | LOC113534668 |
| XR_004578377.1 | lncRNA | downstream | 472137 | 15719157 ~ 15726357 (-) | False | LOC113534668 |
| TU118894 | lncRNA | upstream | 34324 | 16233022 ~ 16233273 (-) | True | G100298 |
| TU118898 | lncRNA | upstream | 119591 | 16318289 ~ 16318736 (-) | True | G100302 |
| TU118903 | lncRNA | upstream | 150759 | 16349457 ~ 16349787 (-) | True | G100307 |
| TU118905 | lncRNA | upstream | 157900 | 16356598 ~ 16356815 (-) | True | G100309 |
| TU118911 | lncRNA | upstream | 185859 | 16384557 ~ 16384788 (-) | True | G100315 |
| XM_026927326.2 | mRNA | downstream | 114881 | 16074947 ~ 16083613 (-) | False | nr2f2 |
| XM_026927325.2 | mRNA | downstream | 118229 | 16074947 ~ 16080265 (-) | False | nr2f2 |
| XM_026927324.2 | mRNA | downstream | 118229 | 16074947 ~ 16080265 (-) | True | nr2f2 |
| XM_026927603.2 | mRNA | downstream | 699242 | 15486013 ~ 15499252 (-) | True | hsf4 |
| XM_026927538.2 | mRNA | downstream | 725479 | 15471629 ~ 15473015 (-) | True | LOC113534617 |
| XM_026927644.2 | mRNA | upstream | 382664 | 16581362 ~ 16610310 (-) | True | LOC113534689 |
| XM_034304994.1 | mRNA | upstream | 482224 | 16680922 ~ 16741071 (-) | False | chd2 |
| XM_034304996.1 | mRNA | upstream | 482224 | 16680922 ~ 16741070 (-) | False | chd2 |
| XM_034304995.1 | mRNA | upstream | 482224 | 16680922 ~ 16741069 (-) | False | chd2 |
| XM_034304993.1 | mRNA | upstream | 482224 | 16680922 ~ 16741067 (-) | False | chd2 |
| TU118530 | other | downstream | 843857 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 1851486 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 2409647 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003403534.1 | other | downstream | 2410295 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403537.1 | other | downstream | 2410708 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_004578368.1 | other | upstream | 1887957 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU119855 | other | upstream | 1988749 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_003402833.1 | other | upstream | 3152064 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 3781371 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 4754904 | 20953602 ~ 20966910 (-) | True | G102566 |
