Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118920 |
| length | 258 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G100324 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 16470357 ~ 16470614 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118919 | lncRNA | downstream | 97 | 16469648 ~ 16470260 (-) | True | G100323 |
| TU118918 | lncRNA | downstream | 5315 | 16464830 ~ 16465042 (-) | True | G100322 |
| TU118911 | lncRNA | downstream | 85569 | 16384557 ~ 16384788 (-) | True | G100315 |
| TU118905 | lncRNA | downstream | 113542 | 16356598 ~ 16356815 (-) | True | G100309 |
| TU118903 | lncRNA | downstream | 120570 | 16349457 ~ 16349787 (-) | True | G100307 |
| TU118993 | lncRNA | upstream | 112984 | 16583598 ~ 16584075 (-) | True | G100386 |
| TU118994 | lncRNA | upstream | 114269 | 16584883 ~ 16585171 (-) | True | G100387 |
| TU118995 | lncRNA | upstream | 115047 | 16585661 ~ 16585913 (-) | True | G100388 |
| TU118999 | lncRNA | upstream | 128882 | 16599496 ~ 16599800 (-) | True | G100392 |
| TU119003 | lncRNA | upstream | 145294 | 16615908 ~ 16616224 (-) | True | G100396 |
| XM_026927326.2 | mRNA | downstream | 386744 | 16074947 ~ 16083613 (-) | False | nr2f2 |
| XM_026927325.2 | mRNA | downstream | 390092 | 16074947 ~ 16080265 (-) | False | nr2f2 |
| XM_026927324.2 | mRNA | downstream | 390092 | 16074947 ~ 16080265 (-) | True | nr2f2 |
| XM_026927603.2 | mRNA | downstream | 971105 | 15486013 ~ 15499252 (-) | True | hsf4 |
| XM_026927538.2 | mRNA | downstream | 997342 | 15471629 ~ 15473015 (-) | True | LOC113534617 |
| XM_026927644.2 | mRNA | upstream | 110748 | 16581362 ~ 16610310 (-) | True | LOC113534689 |
| XM_034304994.1 | mRNA | upstream | 210308 | 16680922 ~ 16741071 (-) | False | chd2 |
| XM_034304996.1 | mRNA | upstream | 210308 | 16680922 ~ 16741070 (-) | False | chd2 |
| XM_034304995.1 | mRNA | upstream | 210308 | 16680922 ~ 16741069 (-) | False | chd2 |
| XM_034304993.1 | mRNA | upstream | 210308 | 16680922 ~ 16741067 (-) | False | chd2 |
| TU118530 | other | downstream | 1115720 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 2123349 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 2681510 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003403534.1 | other | downstream | 2682158 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403537.1 | other | downstream | 2682571 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_004578368.1 | other | upstream | 1616041 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU119855 | other | upstream | 1716833 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_003402833.1 | other | upstream | 2880148 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 3509455 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 4482988 | 20953602 ~ 20966910 (-) | True | G102566 |
