Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118961 |
| length | 639 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G100355 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 16669387 ~ 16670025 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118947 | lncRNA | upstream | 84567 | 16584344 ~ 16584820 (+) | True | G100341 |
| TU118946 | lncRNA | upstream | 85440 | 16583621 ~ 16583947 (+) | True | G100340 |
| TU118897 | lncRNA | upstream | 350664 | 16318273 ~ 16318723 (+) | True | G100301 |
| TU118892 | lncRNA | upstream | 460973 | 16208165 ~ 16208414 (+) | True | G100296 |
| TU118888 | lncRNA | upstream | 467317 | 16201861 ~ 16202070 (+) | True | G100292 |
| TU118934 | lncRNA | downstream | 9945 | 16679970 ~ 16680793 (+) | False | rgma |
| XR_004578304.1 | lncRNA | downstream | 80982 | 16751007 ~ 16755979 (+) | True | LOC117597522 |
| XR_004578303.1 | lncRNA | downstream | 83209 | 16753234 ~ 16755979 (+) | False | LOC117597522 |
| XR_004578302.1 | lncRNA | downstream | 83209 | 16753234 ~ 16755979 (+) | False | LOC117597522 |
| XR_004578305.1 | lncRNA | downstream | 83209 | 16753234 ~ 16755979 (+) | False | LOC117597522 |
| XM_034305372.1 | mRNA | upstream | 158408 | 16500760 ~ 16510979 (+) | True | LOC113534621 |
| XM_034305369.1 | mRNA | upstream | 409214 | 16259445 ~ 16260173 (+) | True | LOC113534692 |
| XM_026927790.2 | mRNA | upstream | 813275 | 15812514 ~ 15856112 (+) | True | mctp2a |
| XM_034305538.1 | mRNA | upstream | 860271 | 15723423 ~ 15809116 (+) | True | mef2aa |
| XM_026927242.2 | mRNA | downstream | 94670 | 16764695 ~ 16816272 (+) | True | slco3a1 |
| XM_026927243.2 | mRNA | downstream | 94670 | 16764695 ~ 16814449 (+) | False | slco3a1 |
| XM_034305391.1 | mRNA | downstream | 168850 | 16838875 ~ 16928642 (+) | True | srpra |
| XM_034305393.1 | mRNA | downstream | 168851 | 16838876 ~ 16928642 (+) | False | srpra |
| XM_034305394.1 | mRNA | downstream | 168851 | 16838876 ~ 16928642 (+) | False | srpra |
| TU118951 | other | upstream | 68320 | 16600257 ~ 16601067 (+) | True | G100345 |
| TU118902 | other | upstream | 319600 | 16349457 ~ 16349787 (+) | True | G100306 |
| XR_004578337.1 | other | upstream | 1323419 | 15300482 ~ 15345968 (+) | False | carmil2 |
| TU117779 | other | upstream | 2144907 | 14520801 ~ 14524480 (+) | True | G99341 |
| XR_004578308.1 | other | upstream | 2628605 | 14035230 ~ 14040782 (+) | False | skor1b |
| XR_004578324.1 | other | downstream | 730401 | 17400426 ~ 17443468 (+) | False | LOC117597546 |
| XR_003403945.2 | other | downstream | 819521 | 17489546 ~ 17493092 (+) | False | LOC113539654 |
| XR_004578373.1 | other | downstream | 1877900 | 18547925 ~ 18548289 (+) | True | LOC117597608 |
| TU120088 | other | downstream | 1881421 | 18551446 ~ 18551724 (+) | True | G101403 |
| TU120104 | other | downstream | 1928689 | 18598714 ~ 18599375 (+) | True | G101419 |
