Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118968 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G100362 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 16760311 ~ 16760534 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118966 | lncRNA | upstream | 1968 | 16758139 ~ 16758343 (+) | True | G100360 |
| XR_004578304.1 | lncRNA | upstream | 4332 | 16751007 ~ 16755979 (+) | True | LOC117597522 |
| XR_004578303.1 | lncRNA | upstream | 4332 | 16753234 ~ 16755979 (+) | False | LOC117597522 |
| XR_004578302.1 | lncRNA | upstream | 4332 | 16753234 ~ 16755979 (+) | False | LOC117597522 |
| XR_004578305.1 | lncRNA | upstream | 4332 | 16753234 ~ 16755979 (+) | False | LOC117597522 |
| TU118977 | lncRNA | downstream | 61834 | 16822368 ~ 16823102 (+) | True | G100370 |
| TU118986 | lncRNA | downstream | 178201 | 16938735 ~ 16939728 (+) | True | G100379 |
| TU119104 | lncRNA | downstream | 211296 | 16971830 ~ 16972238 (+) | True | G100480 |
| TU119131 | lncRNA | downstream | 250181 | 17010715 ~ 17024228 (+) | True | G100499 |
| XR_004578316.1 | lncRNA | downstream | 277517 | 17038051 ~ 17039276 (+) | True | LOC117597540 |
| XM_026927763.2 | mRNA | upstream | 79776 | 16657601 ~ 16680535 (+) | True | rgma |
| XM_034305372.1 | mRNA | upstream | 249332 | 16500760 ~ 16510979 (+) | True | LOC113534621 |
| XM_034305369.1 | mRNA | upstream | 500138 | 16259445 ~ 16260173 (+) | True | LOC113534692 |
| XM_026927790.2 | mRNA | upstream | 904199 | 15812514 ~ 15856112 (+) | True | mctp2a |
| XM_034305540.1 | mRNA | upstream | 951195 | 15723423 ~ 15809116 (+) | False | mef2aa |
| XM_026927242.2 | mRNA | downstream | 4161 | 16764695 ~ 16816272 (+) | True | slco3a1 |
| XM_026927243.2 | mRNA | downstream | 4161 | 16764695 ~ 16814449 (+) | False | slco3a1 |
| XM_034305391.1 | mRNA | downstream | 78341 | 16838875 ~ 16928642 (+) | True | srpra |
| XM_034305393.1 | mRNA | downstream | 78342 | 16838876 ~ 16928642 (+) | False | srpra |
| XM_034305394.1 | mRNA | downstream | 78342 | 16838876 ~ 16928642 (+) | False | srpra |
| TU118951 | other | upstream | 159244 | 16600257 ~ 16601067 (+) | True | G100345 |
| TU118902 | other | upstream | 410524 | 16349457 ~ 16349787 (+) | True | G100306 |
| XR_004578337.1 | other | upstream | 1414343 | 15300482 ~ 15345968 (+) | False | carmil2 |
| TU117779 | other | upstream | 2235831 | 14520801 ~ 14524480 (+) | True | G99341 |
| XR_004578308.1 | other | upstream | 2719529 | 14035230 ~ 14040782 (+) | False | skor1b |
| XR_004578324.1 | other | downstream | 639892 | 17400426 ~ 17443468 (+) | False | LOC117597546 |
| XR_003403945.2 | other | downstream | 729012 | 17489546 ~ 17493092 (+) | False | LOC113539654 |
| XR_004578373.1 | other | downstream | 1787391 | 18547925 ~ 18548289 (+) | True | LOC117597608 |
| TU120088 | other | downstream | 1790912 | 18551446 ~ 18551724 (+) | True | G101403 |
| TU120104 | other | downstream | 1838180 | 18598714 ~ 18599375 (+) | True | G101419 |
