Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118986 |
| length | 994 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G100379 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 16938735 ~ 16939728 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118977 | lncRNA | upstream | 115633 | 16822368 ~ 16823102 (+) | True | G100370 |
| TU118968 | lncRNA | upstream | 178201 | 16760311 ~ 16760534 (+) | True | G100362 |
| TU118966 | lncRNA | upstream | 180392 | 16758139 ~ 16758343 (+) | True | G100360 |
| XR_004578303.1 | lncRNA | upstream | 182756 | 16753234 ~ 16755979 (+) | False | LOC117597522 |
| TU119104 | lncRNA | downstream | 32102 | 16971830 ~ 16972238 (+) | True | G100480 |
| TU119131 | lncRNA | downstream | 70987 | 17010715 ~ 17024228 (+) | True | G100499 |
| XR_004578316.1 | lncRNA | downstream | 98323 | 17038051 ~ 17039276 (+) | True | LOC117597540 |
| TU119127 | lncRNA | downstream | 148226 | 17087954 ~ 17090706 (+) | True | G100495 |
| TU119167 | lncRNA | downstream | 211225 | 17150953 ~ 17152232 (+) | True | G100532 |
| XM_034305391.1 | mRNA | upstream | 10093 | 16838875 ~ 16928642 (+) | True | srpra |
| XM_034305393.1 | mRNA | upstream | 10093 | 16838876 ~ 16928642 (+) | False | srpra |
| XM_034305394.1 | mRNA | upstream | 10093 | 16838876 ~ 16928642 (+) | False | srpra |
| XM_034305392.1 | mRNA | upstream | 10093 | 16839669 ~ 16928642 (+) | False | srpra |
| XM_026927242.2 | mRNA | upstream | 122463 | 16764695 ~ 16816272 (+) | True | slco3a1 |
| XM_026935710.2 | mRNA | downstream | 39207 | 16978935 ~ 16983976 (+) | True | ppp1r15b |
| XM_026935369.2 | mRNA | downstream | 101629 | 17041357 ~ 17065819 (+) | True | blm |
| XM_026935368.2 | mRNA | downstream | 101632 | 17041360 ~ 17065819 (+) | False | blm |
| XM_026935366.2 | mRNA | downstream | 101641 | 17041369 ~ 17065819 (+) | False | blm |
| XM_026935370.2 | mRNA | downstream | 101641 | 17041369 ~ 17065819 (+) | False | blm |
| TU118951 | other | upstream | 337668 | 16600257 ~ 16601067 (+) | True | G100345 |
| TU118902 | other | upstream | 588948 | 16349457 ~ 16349787 (+) | True | G100306 |
| XR_004578337.1 | other | upstream | 1592767 | 15300482 ~ 15345968 (+) | False | carmil2 |
| TU117779 | other | upstream | 2414255 | 14520801 ~ 14524480 (+) | True | G99341 |
| XR_004578308.1 | other | upstream | 2897953 | 14035230 ~ 14040782 (+) | False | skor1b |
| XR_004578324.1 | other | downstream | 460698 | 17400426 ~ 17443468 (+) | False | LOC117597546 |
| XR_003403945.2 | other | downstream | 549818 | 17489546 ~ 17493092 (+) | False | LOC113539654 |
| XR_004578373.1 | other | downstream | 1608197 | 18547925 ~ 18548289 (+) | True | LOC117597608 |
| TU120088 | other | downstream | 1611718 | 18551446 ~ 18551724 (+) | True | G101403 |
| TU120104 | other | downstream | 1658986 | 18598714 ~ 18599375 (+) | True | G101419 |
