Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118999 |
| length | 305 |
| lncRNA type | intronic |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G100392 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 16599496 ~ 16599800 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118995 | lncRNA | downstream | 13583 | 16585661 ~ 16585913 (-) | True | G100388 |
| TU118994 | lncRNA | downstream | 14325 | 16584883 ~ 16585171 (-) | True | G100387 |
| TU118993 | lncRNA | downstream | 15421 | 16583598 ~ 16584075 (-) | True | G100386 |
| TU118920 | lncRNA | downstream | 128882 | 16470357 ~ 16470614 (-) | True | G100324 |
| TU118919 | lncRNA | downstream | 129236 | 16469648 ~ 16470260 (-) | True | G100323 |
| TU119003 | lncRNA | upstream | 16108 | 16615908 ~ 16616224 (-) | True | G100396 |
| TU119004 | lncRNA | upstream | 55140 | 16654940 ~ 16655237 (-) | True | G100397 |
| TU119006 | lncRNA | upstream | 57846 | 16657646 ~ 16657909 (-) | True | G100399 |
| TU119009 | lncRNA | upstream | 66037 | 16665837 ~ 16666054 (-) | True | G100402 |
| TU119012 | lncRNA | upstream | 68398 | 16668198 ~ 16668540 (-) | True | G100405 |
| XM_026927326.2 | mRNA | downstream | 515883 | 16074947 ~ 16083613 (-) | False | nr2f2 |
| XM_026927325.2 | mRNA | downstream | 519231 | 16074947 ~ 16080265 (-) | False | nr2f2 |
| XM_026927324.2 | mRNA | downstream | 519231 | 16074947 ~ 16080265 (-) | True | nr2f2 |
| XM_026927603.2 | mRNA | downstream | 1100244 | 15486013 ~ 15499252 (-) | True | hsf4 |
| XM_026927538.2 | mRNA | downstream | 1126481 | 15471629 ~ 15473015 (-) | True | LOC113534617 |
| XM_034304994.1 | mRNA | upstream | 81122 | 16680922 ~ 16741071 (-) | False | chd2 |
| XM_034304996.1 | mRNA | upstream | 81122 | 16680922 ~ 16741070 (-) | False | chd2 |
| XM_034304995.1 | mRNA | upstream | 81122 | 16680922 ~ 16741069 (-) | False | chd2 |
| XM_034304993.1 | mRNA | upstream | 81122 | 16680922 ~ 16741067 (-) | False | chd2 |
| XM_034304992.1 | mRNA | upstream | 81122 | 16680922 ~ 16741067 (-) | True | chd2 |
| TU118530 | other | downstream | 1244859 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 2252488 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 2810649 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003403534.1 | other | downstream | 2811297 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403537.1 | other | downstream | 2811710 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_004578368.1 | other | upstream | 1486855 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU119855 | other | upstream | 1587647 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_003402833.1 | other | upstream | 2750962 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 3380269 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 4353802 | 20953602 ~ 20966910 (-) | True | G102566 |
