Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU119295 |
| length | 1276 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G100648 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 17188158 ~ 17189433 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU119276 | lncRNA | downstream | 36980 | 17150897 ~ 17151178 (-) | True | G100629 |
| TU119251 | lncRNA | downstream | 72824 | 17115115 ~ 17115334 (-) | True | G100604 |
| TU119022 | lncRNA | downstream | 254336 | 16920567 ~ 16933822 (-) | True | G100408 |
| TU119069 | lncRNA | downstream | 348049 | 16838916 ~ 16840109 (-) | True | LOC117597576 |
| XR_004578338.1 | lncRNA | downstream | 348640 | 16839015 ~ 16839518 (-) | False | LOC117597576 |
| TU119311 | lncRNA | upstream | 59745 | 17249178 ~ 17264409 (-) | True | G100663 |
| XR_003403938.2 | lncRNA | upstream | 156196 | 17345629 ~ 17354761 (-) | True | LOC113539580 |
| TU119386 | lncRNA | upstream | 217657 | 17407090 ~ 17407386 (-) | True | G100727 |
| TU119395 | lncRNA | upstream | 266619 | 17456052 ~ 17457045 (-) | True | G100735 |
| TU119402 | lncRNA | upstream | 303979 | 17493412 ~ 17493623 (-) | True | G100739 |
| XM_034305544.1 | mRNA | downstream | 28341 | 17088641 ~ 17159817 (-) | False | LOC113539712 |
| XM_034305549.1 | mRNA | downstream | 82646 | 17088641 ~ 17105512 (-) | False | LOC113539712 |
| XM_034305546.1 | mRNA | downstream | 82646 | 17088641 ~ 17105512 (-) | False | LOC113539712 |
| XM_034305009.1 | mRNA | downstream | 243728 | 16938891 ~ 16944430 (-) | True | LOC117597525 |
| XM_034304995.1 | mRNA | downstream | 447089 | 16680922 ~ 16741069 (-) | False | chd2 |
| XM_034305181.1 | mRNA | upstream | 232928 | 17422361 ~ 17478283 (-) | True | alpk3a |
| XM_034305183.1 | mRNA | upstream | 232928 | 17422361 ~ 17477608 (-) | False | alpk3a |
| XM_034305182.1 | mRNA | upstream | 234016 | 17423449 ~ 17478285 (-) | False | alpk3a |
| XM_034305437.1 | mRNA | upstream | 531112 | 17720545 ~ 17725320 (-) | True | LOC117597582 |
| XM_034305438.1 | mRNA | upstream | 531112 | 17720545 ~ 17725315 (-) | False | LOC117597582 |
| TU118530 | other | downstream | 1833521 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 2841150 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 3399311 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003403534.1 | other | downstream | 3399959 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403537.1 | other | downstream | 3400372 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_004578368.1 | other | upstream | 897222 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU119855 | other | upstream | 998014 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_003402833.1 | other | upstream | 2161329 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 2790636 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 3764169 | 20953602 ~ 20966910 (-) | True | G102566 |
