Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120104 |
| length | 662 |
| RNA type | TUCP |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G101419 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 18598714 ~ 18599375 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120102 | lncRNA | upstream | 1008 | 18597491 ~ 18597706 (+) | True | G101417 |
| TU120096 | lncRNA | upstream | 28949 | 18568998 ~ 18569765 (+) | True | G101411 |
| TU120087 | lncRNA | upstream | 49461 | 18549045 ~ 18549253 (+) | True | G101402 |
| XR_004578374.1 | lncRNA | upstream | 53048 | 18545172 ~ 18545666 (+) | True | LOC117597609 |
| TU120073 | lncRNA | upstream | 60905 | 18537586 ~ 18537809 (+) | True | G101388 |
| TU120107 | lncRNA | downstream | 2547 | 18601922 ~ 18602186 (+) | True | G101422 |
| TU120121 | lncRNA | downstream | 143705 | 18743080 ~ 18743291 (+) | True | G101436 |
| TU120129 | lncRNA | downstream | 153706 | 18753081 ~ 18753287 (+) | True | G101444 |
| XR_003403813.2 | lncRNA | downstream | 203261 | 18802636 ~ 18816962 (+) | True | LOC113538061 |
| TU120273 | lncRNA | downstream | 269725 | 18869100 ~ 18869377 (+) | True | G101583 |
| XM_026932801.2 | mRNA | upstream | 357105 | 18224061 ~ 18241609 (+) | True | cd81b |
| XM_026932718.2 | mRNA | upstream | 410230 | 17761517 ~ 18188484 (+) | False | reln |
| XM_026932450.2 | mRNA | downstream | 82142 | 18681517 ~ 18732814 (+) | True | idh2 |
| XM_034304954.1 | mRNA | downstream | 358053 | 18957428 ~ 19122497 (+) | True | sema4ba |
| XM_026913484.2 | mRNA | downstream | 358053 | 18957428 ~ 19122497 (+) | False | sema4ba |
| XM_026914192.2 | mRNA | downstream | 560611 | 19159986 ~ 19239977 (+) | False | zgc:162879 |
| XM_026914191.2 | mRNA | downstream | 560622 | 19159997 ~ 19239977 (+) | True | zgc:162879 |
| TU120088 | other | upstream | 46990 | 18551446 ~ 18551724 (+) | True | G101403 |
| XR_004578373.1 | other | upstream | 50425 | 18547925 ~ 18548289 (+) | True | LOC117597608 |
| XR_003403945.2 | other | upstream | 1105622 | 17489546 ~ 17493092 (+) | False | LOC113539654 |
| XR_004578324.1 | other | upstream | 1155246 | 17400426 ~ 17443468 (+) | False | LOC117597546 |
| TU118951 | other | upstream | 1997647 | 16600257 ~ 16601067 (+) | True | G100345 |
| TU120119 | other | downstream | 138968 | 18738343 ~ 18739998 (+) | True | G101434 |
| TU120151 | other | downstream | 194260 | 18793635 ~ 18794273 (+) | True | G101466 |
| XR_004578298.1 | other | downstream | 358053 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120293 | other | downstream | 523237 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_003402807.2 | other | downstream | 2426652 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
