Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120284 |
| length | 283 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G101593 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 18905045 ~ 18905327 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120276 | lncRNA | upstream | 32587 | 18872242 ~ 18872458 (+) | True | G101586 |
| TU120273 | lncRNA | upstream | 35668 | 18869100 ~ 18869377 (+) | True | G101583 |
| XR_003403813.2 | lncRNA | upstream | 88083 | 18802636 ~ 18816962 (+) | True | LOC113538061 |
| TU120129 | lncRNA | upstream | 151758 | 18753081 ~ 18753287 (+) | True | G101444 |
| TU120121 | lncRNA | upstream | 161754 | 18743080 ~ 18743291 (+) | True | G101436 |
| TU120294 | lncRNA | downstream | 218697 | 19124024 ~ 19125229 (+) | True | G101603 |
| TU120508 | lncRNA | downstream | 334789 | 19240116 ~ 19240762 (+) | True | G101803 |
| TU120513 | lncRNA | downstream | 347485 | 19252812 ~ 19253426 (+) | True | G101808 |
| TU120517 | lncRNA | downstream | 361992 | 19267319 ~ 19267545 (+) | True | G101812 |
| TU120518 | lncRNA | downstream | 366526 | 19271853 ~ 19272115 (+) | True | G101813 |
| XM_026932450.2 | mRNA | upstream | 172231 | 18681517 ~ 18732814 (+) | True | idh2 |
| XM_026932801.2 | mRNA | upstream | 663436 | 18224061 ~ 18241609 (+) | True | cd81b |
| XM_034305510.1 | mRNA | upstream | 716561 | 17761883 ~ 18188484 (+) | False | reln |
| XM_034305511.1 | mRNA | upstream | 735776 | 17761517 ~ 18169269 (+) | False | reln |
| XM_034304954.1 | mRNA | downstream | 52101 | 18957428 ~ 19122497 (+) | True | sema4ba |
| XM_026913484.2 | mRNA | downstream | 52101 | 18957428 ~ 19122497 (+) | False | sema4ba |
| XM_026914192.2 | mRNA | downstream | 254659 | 19159986 ~ 19239977 (+) | False | zgc:162879 |
| XM_026914191.2 | mRNA | downstream | 254670 | 19159997 ~ 19239977 (+) | True | zgc:162879 |
| XM_034305494.1 | mRNA | downstream | 255094 | 19160421 ~ 19239977 (+) | False | zgc:162879 |
| TU120151 | other | upstream | 110772 | 18793635 ~ 18794273 (+) | True | G101466 |
| TU120119 | other | upstream | 165047 | 18738343 ~ 18739998 (+) | True | G101434 |
| TU120104 | other | upstream | 305670 | 18598714 ~ 18599375 (+) | True | G101419 |
| TU120088 | other | upstream | 353321 | 18551446 ~ 18551724 (+) | True | G101403 |
| XR_004578373.1 | other | upstream | 356756 | 18547925 ~ 18548289 (+) | True | LOC117597608 |
| XR_004578298.1 | other | downstream | 52101 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120293 | other | downstream | 217285 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_003402807.2 | other | downstream | 2120700 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU122021 | other | downstream | 2881789 | 21787116 ~ 21794669 (+) | False | zbbx |
| TU122269 | other | downstream | 4047350 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
