Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120508 |
| length | 647 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G101803 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 19240116 ~ 19240762 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120294 | lncRNA | upstream | 114887 | 19124024 ~ 19125229 (+) | True | G101603 |
| TU120284 | lncRNA | upstream | 334789 | 18905045 ~ 18905327 (+) | True | G101593 |
| TU120276 | lncRNA | upstream | 367658 | 18872242 ~ 18872458 (+) | True | G101586 |
| TU120273 | lncRNA | upstream | 370739 | 18869100 ~ 18869377 (+) | True | G101583 |
| XR_003403813.2 | lncRNA | upstream | 423154 | 18802636 ~ 18816962 (+) | True | LOC113538061 |
| TU120513 | lncRNA | downstream | 12050 | 19252812 ~ 19253426 (+) | True | G101808 |
| TU120517 | lncRNA | downstream | 26557 | 19267319 ~ 19267545 (+) | True | G101812 |
| TU120518 | lncRNA | downstream | 31091 | 19271853 ~ 19272115 (+) | True | G101813 |
| TU120529 | lncRNA | downstream | 60492 | 19301254 ~ 19301961 (+) | True | G101824 |
| TU120566 | lncRNA | downstream | 94819 | 19335581 ~ 19335782 (+) | True | G101855 |
| XM_026914192.2 | mRNA | upstream | 139 | 19159986 ~ 19239977 (+) | False | zgc:162879 |
| XM_026914191.2 | mRNA | upstream | 139 | 19159997 ~ 19239977 (+) | True | zgc:162879 |
| XM_034305494.1 | mRNA | upstream | 139 | 19160421 ~ 19239977 (+) | False | zgc:162879 |
| XM_034304954.1 | mRNA | upstream | 117619 | 18957428 ~ 19122497 (+) | True | sema4ba |
| XM_026913484.2 | mRNA | upstream | 117619 | 18957428 ~ 19122497 (+) | False | sema4ba |
| XM_026913320.2 | mRNA | downstream | 38388 | 19279150 ~ 19283703 (+) | True | psmd8 |
| XM_026913387.2 | mRNA | downstream | 54730 | 19295492 ~ 19308801 (+) | True | spred3 |
| XM_026913388.2 | mRNA | downstream | 56803 | 19297565 ~ 19308801 (+) | False | spred3 |
| XM_026913410.2 | mRNA | downstream | 113364 | 19354126 ~ 19360323 (+) | True | LOC113526414 |
| XM_026914425.2 | mRNA | downstream | 277841 | 19518603 ~ 19526473 (+) | False | lmo2 |
| TU120293 | other | upstream | 116239 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_004578298.1 | other | upstream | 118990 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120151 | other | upstream | 445843 | 18793635 ~ 18794273 (+) | True | G101466 |
| TU120119 | other | upstream | 500118 | 18738343 ~ 18739998 (+) | True | G101434 |
| TU120104 | other | upstream | 640741 | 18598714 ~ 18599375 (+) | True | G101419 |
| XR_003402807.2 | other | downstream | 1785265 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU122021 | other | downstream | 2546354 | 21787116 ~ 21794669 (+) | False | zbbx |
| TU122269 | other | downstream | 3711915 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
| trnak-cuu_22 | other | downstream | 3922345 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| XR_003402832.2 | other | downstream | 4031296 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
