Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120685 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G101955 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 19585640 ~ 19585839 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120668 | lncRNA | downstream | 1871 | 19500337 ~ 19583769 (-) | True | G101939 |
| XR_003402812.2 | lncRNA | downstream | 67878 | 19514799 ~ 19517762 (-) | True | LOC113526834 |
| TU120665 | lncRNA | downstream | 94385 | 19490529 ~ 19491255 (-) | True | G101938 |
| TU120659 | lncRNA | downstream | 190336 | 19395071 ~ 19395304 (-) | True | G101932 |
| TU120585 | lncRNA | downstream | 221831 | 19362572 ~ 19363809 (-) | True | LOC113526920 |
| TU120832 | lncRNA | upstream | 268691 | 19854530 ~ 19854763 (-) | True | G102082 |
| TU120887 | lncRNA | upstream | 357872 | 19943711 ~ 19967777 (-) | True | G102129 |
| TU120906 | lncRNA | upstream | 413124 | 19998963 ~ 19999181 (-) | True | G102146 |
| TU120907 | lncRNA | upstream | 414262 | 20000101 ~ 20000323 (-) | True | G102147 |
| TU120999 | lncRNA | upstream | 503752 | 20089591 ~ 20092328 (-) | True | G102224 |
| XM_026913684.2 | mRNA | downstream | 88647 | 19407050 ~ 19496993 (-) | True | pik3c2a |
| XM_026913687.2 | mRNA | downstream | 88650 | 19407050 ~ 19496990 (-) | False | pik3c2a |
| XM_026913714.2 | mRNA | downstream | 252210 | 19309888 ~ 19333430 (-) | True | dhx34 |
| XM_026932413.2 | mRNA | downstream | 843916 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026913612.2 | mRNA | upstream | 465493 | 20051332 ~ 20054436 (-) | True | LOC113526513 |
| XM_026913745.2 | mRNA | upstream | 629303 | 20215142 ~ 20292323 (-) | True | nectin1b |
| XM_026913303.2 | mRNA | upstream | 776491 | 20362330 ~ 20377332 (-) | True | si:ch211-132b12.7 |
| XM_026913555.2 | mRNA | upstream | 796971 | 20382810 ~ 20389633 (-) | True | ccnp |
| XM_026913651.2 | mRNA | upstream | 810027 | 20395866 ~ 20416574 (-) | True | akt2 |
| XR_003402833.1 | other | downstream | 234697 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| TU119855 | other | downstream | 1388834 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578368.1 | other | downstream | 1498669 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU118530 | other | downstream | 4231003 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 5238632 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003402829.1 | other | upstream | 394230 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 1367763 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_004578325.1 | other | upstream | 1409502 | 20995341 ~ 21013100 (-) | False | sertad3 |
| XR_004578321.1 | other | upstream | 2648864 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578330.1 | other | upstream | 4005106 | 23590945 ~ 23610448 (-) | True | mmp23bb |
