Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120887 |
| length | 987 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G102129 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 19943711 ~ 19967777 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120832 | lncRNA | downstream | 88948 | 19854530 ~ 19854763 (-) | True | G102082 |
| TU120685 | lncRNA | downstream | 357872 | 19585640 ~ 19585839 (-) | True | G101955 |
| TU120668 | lncRNA | downstream | 359942 | 19500337 ~ 19583769 (-) | True | G101939 |
| XR_003402812.2 | lncRNA | downstream | 425949 | 19514799 ~ 19517762 (-) | True | LOC113526834 |
| TU120665 | lncRNA | downstream | 452456 | 19490529 ~ 19491255 (-) | True | G101938 |
| TU120906 | lncRNA | upstream | 31186 | 19998963 ~ 19999181 (-) | True | G102146 |
| TU120907 | lncRNA | upstream | 32324 | 20000101 ~ 20000323 (-) | True | G102147 |
| TU120999 | lncRNA | upstream | 121814 | 20089591 ~ 20092328 (-) | True | G102224 |
| TU121000 | lncRNA | upstream | 125207 | 20092984 ~ 20093802 (-) | True | G102225 |
| TU121045 | lncRNA | upstream | 276558 | 20244335 ~ 20290991 (-) | True | G102270 |
| XM_026913684.2 | mRNA | downstream | 446718 | 19407050 ~ 19496993 (-) | True | pik3c2a |
| XM_026913687.2 | mRNA | downstream | 446721 | 19407050 ~ 19496990 (-) | False | pik3c2a |
| XM_026913714.2 | mRNA | downstream | 610281 | 19309888 ~ 19333430 (-) | True | dhx34 |
| XM_026932413.2 | mRNA | downstream | 1201987 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026913612.2 | mRNA | upstream | 83555 | 20051332 ~ 20054436 (-) | True | LOC113526513 |
| XM_026913745.2 | mRNA | upstream | 247365 | 20215142 ~ 20292323 (-) | True | nectin1b |
| XM_026913303.2 | mRNA | upstream | 394553 | 20362330 ~ 20377332 (-) | True | si:ch211-132b12.7 |
| XM_026913555.2 | mRNA | upstream | 415033 | 20382810 ~ 20389633 (-) | True | ccnp |
| XM_026913651.2 | mRNA | upstream | 428089 | 20395866 ~ 20416574 (-) | True | akt2 |
| XR_003402833.1 | other | downstream | 592768 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| TU119855 | other | downstream | 1746905 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578368.1 | other | downstream | 1856740 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU118530 | other | downstream | 4589074 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 5596703 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003402829.1 | other | upstream | 12292 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 985825 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_004578325.1 | other | upstream | 1027564 | 20995341 ~ 21013100 (-) | False | sertad3 |
| XR_004578321.1 | other | upstream | 2266926 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578330.1 | other | upstream | 3623168 | 23590945 ~ 23610448 (-) | True | mmp23bb |
