Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120906 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G102146 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 19998963 ~ 19999181 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120887 | lncRNA | downstream | 31186 | 19943711 ~ 19967777 (-) | True | G102129 |
| TU120832 | lncRNA | downstream | 144200 | 19854530 ~ 19854763 (-) | True | G102082 |
| TU120685 | lncRNA | downstream | 413124 | 19585640 ~ 19585839 (-) | True | G101955 |
| TU120668 | lncRNA | downstream | 415194 | 19500337 ~ 19583769 (-) | True | G101939 |
| XR_003402812.2 | lncRNA | downstream | 481201 | 19514799 ~ 19517762 (-) | True | LOC113526834 |
| TU120907 | lncRNA | upstream | 920 | 20000101 ~ 20000323 (-) | True | G102147 |
| TU120999 | lncRNA | upstream | 90410 | 20089591 ~ 20092328 (-) | True | G102224 |
| TU121000 | lncRNA | upstream | 93803 | 20092984 ~ 20093802 (-) | True | G102225 |
| TU121045 | lncRNA | upstream | 245154 | 20244335 ~ 20290991 (-) | True | G102270 |
| TU121046 | lncRNA | upstream | 258151 | 20257332 ~ 20263140 (-) | True | G102271 |
| XM_026913684.2 | mRNA | downstream | 501970 | 19407050 ~ 19496993 (-) | True | pik3c2a |
| XM_026913687.2 | mRNA | downstream | 501973 | 19407050 ~ 19496990 (-) | False | pik3c2a |
| XM_026913714.2 | mRNA | downstream | 665533 | 19309888 ~ 19333430 (-) | True | dhx34 |
| XM_026932413.2 | mRNA | downstream | 1257239 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026913612.2 | mRNA | upstream | 52151 | 20051332 ~ 20054436 (-) | True | LOC113526513 |
| XM_026913745.2 | mRNA | upstream | 215961 | 20215142 ~ 20292323 (-) | True | nectin1b |
| XM_026913303.2 | mRNA | upstream | 363149 | 20362330 ~ 20377332 (-) | True | si:ch211-132b12.7 |
| XM_026913555.2 | mRNA | upstream | 383629 | 20382810 ~ 20389633 (-) | True | ccnp |
| XM_026913651.2 | mRNA | upstream | 396685 | 20395866 ~ 20416574 (-) | True | akt2 |
| XR_003402829.1 | other | downstream | 18704 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| XR_003402833.1 | other | downstream | 648020 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| TU119855 | other | downstream | 1802157 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578368.1 | other | downstream | 1911992 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU118530 | other | downstream | 4644326 | 15347166 ~ 15354637 (-) | True | tmem170a |
| TU121422 | other | upstream | 954421 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_004578325.1 | other | upstream | 996160 | 20995341 ~ 21013100 (-) | False | sertad3 |
| XR_004578321.1 | other | upstream | 2235522 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578330.1 | other | upstream | 3591764 | 23590945 ~ 23610448 (-) | True | mmp23bb |
| TU123617 | other | upstream | 4624335 | 24623516 ~ 24711368 (-) | True | G104473 |
