Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120935 |
| length | 391 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 1 |
| gene id | ddx6 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 20076965 ~ 20092932 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120875 | lncRNA | upstream | 37167 | 20055032 ~ 20055232 (+) | True | G102124 |
| TU120855 | lncRNA | upstream | 39717 | 20052310 ~ 20052682 (+) | False | bcl9l |
| TU120859 | lncRNA | upstream | 92725 | 19999392 ~ 19999674 (+) | True | G102108 |
| TU120857 | lncRNA | upstream | 94316 | 19997871 ~ 19998083 (+) | True | G102106 |
| TU120849 | lncRNA | upstream | 109252 | 19982947 ~ 19983147 (+) | True | G102098 |
| TU121062 | lncRNA | downstream | 303078 | 20395867 ~ 20397389 (+) | True | G102285 |
| TU121063 | lncRNA | downstream | 303078 | 20395867 ~ 20399958 (+) | False | G102285 |
| TU121065 | lncRNA | downstream | 329232 | 20422021 ~ 20424905 (+) | False | G102286 |
| TU121067 | lncRNA | downstream | 329232 | 20422021 ~ 20430288 (+) | True | G102286 |
| TU121064 | lncRNA | downstream | 367472 | 20460261 ~ 20461015 (+) | False | G102286 |
| XM_026913609.2 | mRNA | upstream | 39257 | 20004358 ~ 20053142 (+) | False | bcl9l |
| XM_026914098.2 | mRNA | downstream | 4906 | 20097695 ~ 20115417 (+) | True | treh |
| XM_026914100.2 | mRNA | downstream | 4906 | 20097695 ~ 20115417 (+) | False | treh |
| XM_026914235.2 | mRNA | downstream | 265424 | 20358213 ~ 20360195 (+) | True | ttc36 |
| XM_026914159.2 | mRNA | downstream | 480492 | 20573281 ~ 20629325 (+) | False | trip12 |
| XM_026914157.2 | mRNA | downstream | 480527 | 20573316 ~ 20629325 (+) | False | trip12 |
| TU120293 | other | upstream | 968522 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_004578298.1 | other | upstream | 971273 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120151 | other | upstream | 1298126 | 18793635 ~ 18794273 (+) | True | G101466 |
| TU120119 | other | upstream | 1352401 | 18738343 ~ 18739998 (+) | True | G101434 |
| TU120104 | other | upstream | 1493024 | 18598714 ~ 18599375 (+) | True | G101419 |
| XR_003402807.2 | other | downstream | 933238 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU122021 | other | downstream | 1694327 | 21787116 ~ 21794669 (+) | False | zbbx |
| TU122269 | other | downstream | 2859888 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
| trnak-cuu_22 | other | downstream | 3070318 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| XR_003402832.2 | other | downstream | 3179269 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
