Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU121064 |
| length | 700 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | G102286 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 20422021 ~ 20464632 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU121067 | lncRNA | upstream | 29973 | 20422021 ~ 20430288 (+) | True | G102286 |
| TU121065 | lncRNA | upstream | 35356 | 20422021 ~ 20424905 (+) | False | G102286 |
| TU121063 | lncRNA | upstream | 60303 | 20395867 ~ 20399958 (+) | False | G102285 |
| TU121062 | lncRNA | upstream | 62872 | 20395867 ~ 20397389 (+) | True | G102285 |
| TU120935 | lncRNA | upstream | 367472 | 20092399 ~ 20092789 (+) | False | ddx6 |
| TU121068 | lncRNA | downstream | 2030 | 20463045 ~ 20464632 (+) | False | G102286 |
| TU121108 | lncRNA | downstream | 12327 | 20473342 ~ 20473737 (+) | True | G102325 |
| TU121110 | lncRNA | downstream | 14789 | 20475804 ~ 20476171 (+) | True | G102327 |
| TU121162 | lncRNA | downstream | 117603 | 20578618 ~ 20581945 (+) | True | G102370 |
| TU121167 | lncRNA | downstream | 145587 | 20606602 ~ 20607594 (+) | True | G102374 |
| XM_026914235.2 | mRNA | upstream | 100066 | 20358213 ~ 20360195 (+) | True | ttc36 |
| XM_026914098.2 | mRNA | upstream | 344844 | 20097695 ~ 20115417 (+) | True | treh |
| XM_026914100.2 | mRNA | upstream | 344844 | 20097695 ~ 20115417 (+) | False | treh |
| XM_026914147.2 | mRNA | upstream | 367329 | 20076965 ~ 20092932 (+) | True | ddx6 |
| XM_034305142.1 | mRNA | upstream | 407119 | 20035968 ~ 20053142 (+) | False | bcl9l |
| XM_026914159.2 | mRNA | downstream | 112266 | 20573281 ~ 20629325 (+) | False | trip12 |
| XM_026914157.2 | mRNA | downstream | 112301 | 20573316 ~ 20629325 (+) | False | trip12 |
| XM_026914160.2 | mRNA | downstream | 112317 | 20573332 ~ 20629325 (+) | False | trip12 |
| XM_026914156.2 | mRNA | downstream | 112828 | 20573843 ~ 20629325 (+) | False | trip12 |
| XM_026914155.2 | mRNA | downstream | 112838 | 20573853 ~ 20630604 (+) | True | trip12 |
| TU120293 | other | upstream | 1336384 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_004578298.1 | other | upstream | 1339135 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120151 | other | upstream | 1665988 | 18793635 ~ 18794273 (+) | True | G101466 |
| TU120119 | other | upstream | 1720263 | 18738343 ~ 18739998 (+) | True | G101434 |
| TU120104 | other | upstream | 1860886 | 18598714 ~ 18599375 (+) | True | G101419 |
| XR_003402807.2 | other | downstream | 565012 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU122021 | other | downstream | 1326101 | 21787116 ~ 21794669 (+) | False | zbbx |
| TU122269 | other | downstream | 2491662 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
| trnak-cuu_22 | other | downstream | 2702092 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| XR_003402832.2 | other | downstream | 2811043 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
