Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU121068 |
| length | 312 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G102286 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 20422021 ~ 20464632 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU121064 | lncRNA | upstream | 2030 | 20460261 ~ 20461015 (+) | False | G102286 |
| TU121067 | lncRNA | upstream | 32757 | 20422021 ~ 20430288 (+) | True | G102286 |
| TU121065 | lncRNA | upstream | 38140 | 20422021 ~ 20424905 (+) | False | G102286 |
| TU121063 | lncRNA | upstream | 63087 | 20395867 ~ 20399958 (+) | False | G102285 |
| TU121062 | lncRNA | upstream | 65656 | 20395867 ~ 20397389 (+) | True | G102285 |
| TU121108 | lncRNA | downstream | 8710 | 20473342 ~ 20473737 (+) | True | G102325 |
| TU121110 | lncRNA | downstream | 11172 | 20475804 ~ 20476171 (+) | True | G102327 |
| TU121162 | lncRNA | downstream | 113986 | 20578618 ~ 20581945 (+) | True | G102370 |
| TU121167 | lncRNA | downstream | 141970 | 20606602 ~ 20607594 (+) | True | G102374 |
| TU121172 | lncRNA | downstream | 174128 | 20638760 ~ 20686188 (+) | False | pid1 |
| XM_026914235.2 | mRNA | upstream | 102850 | 20358213 ~ 20360195 (+) | True | ttc36 |
| XM_026914098.2 | mRNA | upstream | 347628 | 20097695 ~ 20115417 (+) | True | treh |
| XM_026914100.2 | mRNA | upstream | 347628 | 20097695 ~ 20115417 (+) | False | treh |
| XM_026914147.2 | mRNA | upstream | 370113 | 20076965 ~ 20092932 (+) | True | ddx6 |
| XM_034305142.1 | mRNA | upstream | 409903 | 20035968 ~ 20053142 (+) | False | bcl9l |
| XM_026914159.2 | mRNA | downstream | 108649 | 20573281 ~ 20629325 (+) | False | trip12 |
| XM_026914157.2 | mRNA | downstream | 108684 | 20573316 ~ 20629325 (+) | False | trip12 |
| XM_026914160.2 | mRNA | downstream | 108700 | 20573332 ~ 20629325 (+) | False | trip12 |
| XM_026914156.2 | mRNA | downstream | 109211 | 20573843 ~ 20629325 (+) | False | trip12 |
| XM_026914155.2 | mRNA | downstream | 109221 | 20573853 ~ 20630604 (+) | True | trip12 |
| TU120293 | other | upstream | 1339168 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_004578298.1 | other | upstream | 1341919 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120151 | other | upstream | 1668772 | 18793635 ~ 18794273 (+) | True | G101466 |
| TU120119 | other | upstream | 1723047 | 18738343 ~ 18739998 (+) | True | G101434 |
| TU120104 | other | upstream | 1863670 | 18598714 ~ 18599375 (+) | True | G101419 |
| XR_003402807.2 | other | downstream | 561395 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU122021 | other | downstream | 1322484 | 21787116 ~ 21794669 (+) | False | zbbx |
| TU122269 | other | downstream | 2488045 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
| trnak-cuu_22 | other | downstream | 2698475 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| XR_003402832.2 | other | downstream | 2807426 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
