RNA id: XM_026913651.2


Basic Information

Item Value
RNA id XM_026913651.2
length 3168
RNA type mRNA
GC content 0.47
exon number 14
gene id akt2
representative True

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 20395866 ~ 20416574 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

GCTCTGGTGAGGAGCTGAAGGCctgaagctttaaaaaaaaggcaaaaaaaaaaaaactccaaagtAGATTGGTAAAGTAAAGCAAGAGCGAGAACGGCGTGGCGGAGTCTGAGCTGCGgtgccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtgtgagtgagtgagttagtgtgtgttactggtTGAGATCACTCATCTCACTCTGTGACCTGCTGATCCTCCGACTCCTTCGCCCTCgattgcacacacactgacacacagacgcacactgagacacacacaaacacagcatgaaTGAGGTTAGCGTGGTCAGAGAAGGTTGGCTCCACAAGAGAGGTGAATACATTAAGACATGGAGGCCGCGGTATTTTATCCTGAAGAGTGATGGGTCATTTATCGGTTATAAAGAGAAACCTGATGTGTCCGAGCCAAATCTGCCCCCCCTCAACAACTTTTCtgtagcagAATGCCAGCTGATGAAGACAGAGCGGCCACGTCCCAATACCTTTGTTATTCGCTGCCTTCAGTGGACGACGGTTATTGAGAGAACGTTCCATGTGGACAGTAATGCTGAGAGGGAGGAGTGGATCCGGGCGATCCAGGCTGTAGCAAATGGACTGAAGACGCGAGAGGAGGAGGAGCCGATGGACATTAACTTCGGCTCATCAGGAGACAGCAGCATGGAGACAGCTATGGCAAAATCACGCAGCAAAGTGACAATGAGTGATTTtgattacctgaagctgctgggtAAGGGCACGTTTGGGAAAGTGATCCTGGTCAGAGAGAAAGCAACAGGAGTGCATTATGCCATGAAGATCCTGAGGAAGGAGGTCATCATCGCTAAGgatgAGGTggcacacacagtcacagagagCCGGGTGCTGCAGAACACCAGACACCCCTTCCTTACGACACTAAAGTATGCGTTCCAAACACACGACCGACTTTGCTTTGTCATGGAGTACGCTAACGGAGGCGAGCTGTTTTTCCACCTGTCCCGTGAACGTGTTTTCACGGAAGATCGAGCACAGTTTTATGGAGCTGAAATTGTTTCTGCGCTTGAGTACCTGCACTCACGAGATGTTGTCTACCGAGACCTGAAGCTGGAGAATCTAATGCTGGATAAAGATGGACACATTAAGATCACAGATTTTGGTTTGTGTAAGGAAGGAATTACCAATGAAGCCACCATGAAGACCTTCTGTGGAACTCCAGAGTACCTTGCtcctgagGTACTGGAGGATAATGATTACGGACGGGCAGTAGACTGGTGGGGTTTGGGTGTGGTCATGTATGAAATGATGTGCGGTCGACTGCCGTTCTATAATCAGGACCATGAGCGGCTGTTTGAGCTTATCCTCATGGAGGAGATCAGATTCCCCCGGAACCTGTCACCTGATGCCAAGAGCCTGCTTGCTGGCCTGCTCAAGAAAGACCCTAAACAAAGGTTGGGAGGAAGTTTTGAAGATGCCAAAGAAGTGATGGCTCACAAGTTTTTCTCCTCCATCAACTGGCAGGATGTACTGCAGAAAAAGCTCACCCCCCCTTTTAAGCCTCAGGTGACGTCAGAGACTGATACTCGCTATTTTGATGAGGAGTTCACTTTGCAGACTATCACTGTCACACCGCCTGACCAGTaTGATAGTTTGGATGCGGAGGACTCGGATGCGCGCACACACTTCCCTCAGTTCTCTTACTCTGCCAGTGTTCGAGAGTGATGGAGagacctacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcaccagcaAACCAGATATCATTgcaacacacacctacactcacactgtctcaccAGCAACCTGGACACCACGCTAACAcccattcatacacacactgttacctGTTACCAGCAAACTGGAaaccgtacacacacacacacacacacacacacacacactctgtcaccAGCAAAACAAACACCACGGCAACTTACTCACTGCTATCAGCAGTCTGTTGACTAGTGAAGGCCTTGTTAAGATGTGCCTGATTCAGATTGGTCCTTCAGGCTGTCtgttacactacacactattcACACCTTTTAATAAAATGAGTCATAGACTCATTGTGTTAAACACCTCAGAAacagcatatactgtatacacacactttcttgtATGCACGATTTTAACCGAGTTTAAAACGAAGTAGAACTTCAGATTGTTACAGTTTTTAATACAGGAATGAAATGCACACATGAAGCCATCCTGCAGTGCAAGTGCCCTTTTTATGCATTCAGTTGTTACTGGGGTGTTTCAATAACACATACTGCTGatagagagtgtgtgcgtgtgtgtgtgtagtggtttTGTGTGAatggtgaggtgtgtgtttgttctgaaTGTACAtcttcaagtgtgtgtgtttgttttaattcaattttgtACAGGACCCATAATGTGGGGCGGttgggagggagggagggaggggggtgGGTGCGATTgctgacatatatatatatatatatacacatgcacacacatacagaaaccGTAGATGTGTAAAGGGAAGAGAGCAGCCGCAGCtctgtggatgagtgtgtgtggagtgtgtgtccACTTTCTGCACCTGTAAGGCTGTCATCACTGTGTAACCCAGGGGTCTGCAACAGAGGGCAGAATTCCACACAGTACAAGCACTGGGAAGATGTAGTCTTAGTTTCATTGCTTAGAGACACCAGAGTCGTCACTCAGCAGGTGTAGCAGAGGAATCACTAAACTGTGCTGGGCAGGACTATGCAGAACTCTGCACAGCTCTGCGTGGCCACACCCCACAACTGCAGCCGGCCTCCTGCTGTAAAACACCCAGTCACTCAGCTGTACAATTCTGCAGGCTTTGATGTAaagagatttttattaaatgagaATTTGAAAtgtgtctctcttgctcttctctctgtctctctgtgttatGCTGGTTAATGATCTCATTTAGGATGAGAGCTGAGTGAGTGAGGTGGagtgagttttgtgtgtgtttgttttattttgccttttctgtttgttcttgAACAGATCagacatttgacatttttgcttcttttgttCCTCAAATCGTCCTGATGagctcaatataaatataatctatTCCACAA

Function

GO:

id name namespace
GO:0046326 positive regulation of glucose import biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04456 AKT; RAC serine/threonine-protein kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU121267 lncRNA downstream 36325 20358215 ~ 20359541 (-) True G102434
TU121048 lncRNA downstream 39269 20282185 ~ 20356597 (-) True G102272
TU121045 lncRNA downstream 104875 20244335 ~ 20290991 (-) True G102270
TU121046 lncRNA downstream 132726 20257332 ~ 20263140 (-) True G102271
TU121000 lncRNA downstream 302064 20092984 ~ 20093802 (-) True G102225
TU121277 lncRNA upstream 55297 20471871 ~ 20472745 (-) True G102444
TU121282 lncRNA upstream 61759 20478333 ~ 20478556 (-) True G102449
TU121286 lncRNA upstream 77683 20494257 ~ 20496301 (-) True G102453
TU121318 lncRNA upstream 162116 20578690 ~ 20581168 (-) True G102472
TU121291 lncRNA upstream 222297 20638871 ~ 20686185 (-) True G102458
XM_026913555.2 mRNA downstream 6233 20382810 ~ 20389633 (-) True ccnp
XM_026913303.2 mRNA downstream 18534 20362330 ~ 20377332 (-) True si:ch211-132b12.7
XM_026913745.2 mRNA downstream 103543 20215142 ~ 20292323 (-) True nectin1b
XM_026913612.2 mRNA downstream 341430 20051332 ~ 20054436 (-) True LOC113526513
XM_026913684.2 mRNA downstream 898873 19407050 ~ 19496993 (-) True pik3c2a
XM_026913362.2 mRNA upstream 5699 20422273 ~ 20453147 (-) False vaspb
XM_026913363.2 mRNA upstream 5699 20422273 ~ 20453147 (-) False vaspb
XM_026913361.2 mRNA upstream 5699 20422273 ~ 20453147 (-) True vaspb
XM_026913365.2 mRNA upstream 43769 20460343 ~ 20464685 (-) True snrpd2
XM_034304978.1 mRNA upstream 53786 20470360 ~ 20471089 (-) True foxg1c
XR_003402829.1 other downstream 415607 19980069 ~ 19980259 (-) True LOC113527007
XR_003402833.1 other downstream 1044923 19350762 ~ 19350943 (-) True LOC113527011
TU119855 other downstream 2199060 18187447 ~ 18196806 (-) True G101178
XR_004578368.1 other downstream 2308895 18086655 ~ 18086971 (-) True LOC117597604
TU118530 other downstream 5041229 15347166 ~ 15354637 (-) True tmem170a
TU121422 other upstream 537028 20953602 ~ 20966910 (-) True G102566
XR_004578325.1 other upstream 578767 20995341 ~ 21013100 (-) False sertad3
XR_004578321.1 other upstream 1818129 22234703 ~ 22306769 (-) False si
XR_004578330.1 other upstream 3174371 23590945 ~ 23610448 (-) True mmp23bb
TU123617 other upstream 4206942 24623516 ~ 24711368 (-) True G104473

Expression Profile