Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU122262 |
| length | 305 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G103297 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 22866740 ~ 22869283 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122232 | lncRNA | upstream | 174430 | 22692092 ~ 22692310 (+) | True | G103270 |
| TU122206 | lncRNA | upstream | 340004 | 22526375 ~ 22526736 (+) | True | G103246 |
| TU122086 | lncRNA | upstream | 695906 | 22128369 ~ 22170834 (+) | True | G103140 |
| TU122075 | lncRNA | upstream | 817358 | 22049174 ~ 22049382 (+) | True | G103130 |
| TU121821 | lncRNA | upstream | 1361118 | 21504744 ~ 21505622 (+) | True | G102903 |
| TU122267 | lncRNA | downstream | 29780 | 22899063 ~ 22899437 (+) | True | G103301 |
| TU122270 | lncRNA | downstream | 73426 | 22942709 ~ 22983497 (+) | False | LOC113526422 |
| TU122297 | lncRNA | downstream | 131084 | 23000367 ~ 23006640 (+) | True | G103331 |
| TU122293 | lncRNA | downstream | 236859 | 23106142 ~ 23106241 (+) | True | G103327 |
| TU122322 | lncRNA | downstream | 271564 | 23140847 ~ 23148816 (+) | False | relt |
| XM_026914293.2 | mRNA | upstream | 1053530 | 21762447 ~ 21813210 (+) | True | zbbx |
| XM_034304980.1 | mRNA | upstream | 1133169 | 21689428 ~ 21733571 (+) | True | LOC113526346 |
| XM_026913273.2 | mRNA | upstream | 1184417 | 21664634 ~ 21682323 (+) | False | pdcd10a |
| XM_026913274.2 | mRNA | upstream | 1184417 | 21664886 ~ 21682323 (+) | True | pdcd10a |
| XM_034305269.1 | mRNA | upstream | 1248404 | 21590628 ~ 21618336 (+) | False | golim4a |
| XM_034305146.1 | mRNA | downstream | 13988 | 22883271 ~ 22934025 (+) | False | fam168a |
| XM_034305148.1 | mRNA | downstream | 14011 | 22883294 ~ 22934025 (+) | True | fam168a |
| XM_026913425.2 | mRNA | downstream | 83298 | 22952581 ~ 22983599 (+) | True | LOC113526422 |
| XM_026913424.2 | mRNA | downstream | 83298 | 22952581 ~ 22983599 (+) | False | LOC113526422 |
| XM_034304967.1 | mRNA | downstream | 84092 | 22953375 ~ 22983599 (+) | False | LOC113526422 |
| TU122021 | other | upstream | 1072071 | 21787116 ~ 21794669 (+) | False | zbbx |
| XR_003402807.2 | other | upstream | 1768899 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU120293 | other | upstream | 3742863 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_004578298.1 | other | upstream | 3745614 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120151 | other | upstream | 4072467 | 18793635 ~ 18794273 (+) | True | G101466 |
| TU122269 | other | downstream | 83394 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
| trnak-cuu_22 | other | downstream | 293824 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| XR_003402832.2 | other | downstream | 402775 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
| XR_003402831.1 | other | downstream | 404025 | 23273308 ~ 23273458 (+) | True | LOC113527009 |
| XR_003402830.2 | other | downstream | 405076 | 23274359 ~ 23274509 (+) | True | LOC113527008 |
