Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU122936 |
| length | 649 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | cstf3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 23739502 ~ 23763045 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122929 | lncRNA | upstream | 898 | 23729878 ~ 23738753 (+) | True | G103889 |
| TU122932 | lncRNA | upstream | 898 | 23729878 ~ 23738753 (+) | False | G103889 |
| TU122933 | lncRNA | upstream | 898 | 23729878 ~ 23738753 (+) | False | G103889 |
| TU122868 | lncRNA | upstream | 34423 | 23703588 ~ 23705228 (+) | True | G103832 |
| TU122863 | lncRNA | upstream | 36687 | 23698852 ~ 23702964 (+) | False | G103828 |
| TU122944 | lncRNA | downstream | 6803 | 23749063 ~ 23754260 (+) | True | G103896 |
| TU123375 | lncRNA | downstream | 738105 | 24480365 ~ 24484022 (+) | False | G104257 |
| TU123377 | lncRNA | downstream | 738105 | 24480365 ~ 24484096 (+) | True | G104257 |
| TU123404 | lncRNA | downstream | 822372 | 24564632 ~ 24571887 (+) | True | G104284 |
| TU123458 | lncRNA | downstream | 833232 | 24575492 ~ 24634405 (+) | True | G104325 |
| XM_026913979.2 | mRNA | upstream | 147870 | 23582140 ~ 23591781 (+) | True | pcyt1ab |
| XM_026913467.2 | mRNA | upstream | 163938 | 23572558 ~ 23575713 (+) | True | serp1 |
| XM_026913507.2 | mRNA | upstream | 193780 | 23541234 ~ 23545871 (+) | True | LOC113526461 |
| XM_026913999.2 | mRNA | upstream | 217395 | 23521335 ~ 23522256 (+) | True | ompa |
| XM_026913323.2 | mRNA | upstream | 287091 | 23429156 ~ 23452560 (+) | True | gdpd4a |
| XM_026914406.2 | mRNA | downstream | 114178 | 23856438 ~ 23876045 (+) | False | wt1b |
| XM_026914405.2 | mRNA | downstream | 114178 | 23856438 ~ 23876045 (+) | False | wt1b |
| XM_026914404.2 | mRNA | downstream | 114180 | 23856440 ~ 23876045 (+) | True | wt1b |
| XM_026914329.2 | mRNA | downstream | 581460 | 24323720 ~ 24335065 (+) | True | pex16 |
| XM_026914312.2 | mRNA | downstream | 597375 | 24339635 ~ 24349296 (+) | False | si:ch211-71n6.4 |
| TU122865 | other | upstream | 109928 | 23615103 ~ 23629723 (+) | True | G103830 |
| XR_003402830.2 | other | upstream | 465142 | 23274359 ~ 23274509 (+) | True | LOC113527008 |
| XR_003402831.1 | other | upstream | 466193 | 23273308 ~ 23273458 (+) | True | LOC113527009 |
| XR_003402832.2 | other | upstream | 467443 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
| trnak-cuu_22 | other | upstream | 576472 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| TU123976 | other | downstream | 1552639 | 25294899 ~ 25306811 (+) | True | G104781 |
| TU123982 | other | downstream | 1552639 | 25294899 ~ 25315213 (+) | False | G104781 |
| TU124829 | other | downstream | 3088718 | 26830978 ~ 26833427 (+) | True | G105569 |
| TU125244 | other | downstream | 3469129 | 27211389 ~ 27214570 (+) | True | G105898 |
| trnal-caa_8 | other | downstream | 3816576 | 27558836 ~ 27558946 (+) | True | trnal-caa_8 |
