Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU123930 |
| length | 398 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G104748 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 25243481 ~ 25243878 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123921 | lncRNA | upstream | 176 | 25242800 ~ 25243305 (+) | True | G104739 |
| TU123920 | lncRNA | upstream | 4025 | 25233643 ~ 25239456 (+) | False | LOC113526839 |
| TU123680 | lncRNA | upstream | 134515 | 25013112 ~ 25108966 (+) | True | G104522 |
| TU123714 | lncRNA | upstream | 182181 | 25057875 ~ 25061300 (+) | True | G104554 |
| TU123678 | lncRNA | upstream | 230702 | 25011916 ~ 25012779 (+) | True | G104520 |
| TU123938 | lncRNA | downstream | 1786 | 25245664 ~ 25245865 (+) | True | G104751 |
| TU123977 | lncRNA | downstream | 51021 | 25294899 ~ 25304404 (+) | False | G104781 |
| TU123980 | lncRNA | downstream | 51021 | 25294899 ~ 25304404 (+) | False | G104781 |
| XR_004578347.1 | lncRNA | downstream | 96745 | 25340623 ~ 25342308 (+) | True | LOC117597584 |
| TU124338 | lncRNA | downstream | 659948 | 25903826 ~ 25905288 (+) | True | G105118 |
| XM_026914236.2 | mRNA | upstream | 3268 | 25233625 ~ 25240213 (+) | True | LOC113526839 |
| XM_026913562.2 | mRNA | upstream | 88382 | 25140152 ~ 25155099 (+) | True | hnrnpul1 |
| XM_034305166.1 | mRNA | upstream | 103920 | 25137014 ~ 25139561 (+) | True | opa3 |
| XM_026913986.2 | mRNA | upstream | 203392 | 25035517 ~ 25040089 (+) | False | exosc5 |
| XM_026913987.2 | mRNA | upstream | 204804 | 25035513 ~ 25038677 (+) | True | exosc5 |
| XM_026914077.2 | mRNA | downstream | 6464 | 25250342 ~ 25266857 (+) | True | si:ch211-136a13.1 |
| XM_026914471.2 | mRNA | downstream | 25015 | 25268893 ~ 25282220 (+) | True | yif1b |
| XM_034305489.1 | mRNA | downstream | 25015 | 25268893 ~ 25281629 (+) | False | yif1b |
| XM_026914476.2 | mRNA | downstream | 25015 | 25268893 ~ 25281629 (+) | False | yif1b |
| XM_034305490.1 | mRNA | downstream | 25015 | 25268893 ~ 25281629 (+) | False | yif1b |
| TU122935 | other | upstream | 1501166 | 23739502 ~ 23742315 (+) | False | cstf3 |
| TU122865 | other | upstream | 1613758 | 23615103 ~ 23629723 (+) | True | G103830 |
| XR_003402830.2 | other | upstream | 1968972 | 23274359 ~ 23274509 (+) | True | LOC113527008 |
| XR_003402831.1 | other | upstream | 1970023 | 23273308 ~ 23273458 (+) | True | LOC113527009 |
| XR_003402832.2 | other | upstream | 1971273 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
| TU123976 | other | downstream | 51021 | 25294899 ~ 25306811 (+) | True | G104781 |
| TU123982 | other | downstream | 51021 | 25294899 ~ 25315213 (+) | False | G104781 |
| TU124829 | other | downstream | 1587100 | 26830978 ~ 26833427 (+) | True | G105569 |
| TU125244 | other | downstream | 1967511 | 27211389 ~ 27214570 (+) | True | G105898 |
| trnal-caa_8 | other | downstream | 2314958 | 27558836 ~ 27558946 (+) | True | trnal-caa_8 |
