Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU124808 |
| length | 201 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G105548 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 26697978 ~ 26698178 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU124739 | lncRNA | upstream | 6301 | 26691434 ~ 26691677 (+) | True | G105490 |
| TU124727 | lncRNA | upstream | 86718 | 26610941 ~ 26611260 (+) | True | G105479 |
| TU124690 | lncRNA | upstream | 165890 | 26531335 ~ 26532088 (+) | True | G105449 |
| TU124691 | lncRNA | upstream | 170171 | 26525920 ~ 26527807 (+) | True | G105450 |
| TU124687 | lncRNA | upstream | 181198 | 26513436 ~ 26516780 (+) | True | G105446 |
| TU125000 | lncRNA | downstream | 365177 | 27063355 ~ 27063862 (+) | True | G105733 |
| TU124999 | lncRNA | downstream | 366513 | 27064691 ~ 27066023 (+) | True | G105732 |
| TU125117 | lncRNA | downstream | 431170 | 27129348 ~ 27129629 (+) | True | G105841 |
| TU125136 | lncRNA | downstream | 443667 | 27141845 ~ 27145031 (+) | True | G105855 |
| TU125251 | lncRNA | downstream | 531606 | 27229784 ~ 27234224 (+) | True | G105904 |
| XM_026913539.2 | mRNA | upstream | 16553 | 26648551 ~ 26681425 (+) | True | nptnb |
| XM_026913540.2 | mRNA | upstream | 16553 | 26648551 ~ 26681425 (+) | False | nptnb |
| XM_026913541.2 | mRNA | upstream | 16553 | 26648551 ~ 26681425 (+) | False | nptnb |
| XM_034305272.1 | mRNA | upstream | 53149 | 26636409 ~ 26644829 (+) | True | LOC113526591 |
| XM_026913776.2 | mRNA | upstream | 63481 | 26622446 ~ 26634497 (+) | True | chrna5 |
| XM_026913392.2 | mRNA | downstream | 122989 | 26821167 ~ 26827022 (+) | True | dhdh.2 |
| XM_026913267.2 | mRNA | downstream | 152784 | 26850962 ~ 26875332 (+) | False | LOC113526325 |
| XM_026913268.2 | mRNA | downstream | 152784 | 26850962 ~ 26875332 (+) | False | LOC113526325 |
| XM_026913271.2 | mRNA | downstream | 152784 | 26850962 ~ 26875332 (+) | False | LOC113526325 |
| XM_026913266.2 | mRNA | downstream | 152785 | 26850963 ~ 26875332 (+) | True | LOC113526325 |
| TU123982 | other | upstream | 1382765 | 25294899 ~ 25315213 (+) | False | G104781 |
| TU123976 | other | upstream | 1391167 | 25294899 ~ 25306811 (+) | True | G104781 |
| TU122935 | other | upstream | 2955663 | 23739502 ~ 23742315 (+) | False | cstf3 |
| TU122865 | other | upstream | 3068255 | 23615103 ~ 23629723 (+) | True | G103830 |
| XR_003402830.2 | other | upstream | 3423469 | 23274359 ~ 23274509 (+) | True | LOC113527008 |
| TU124829 | other | downstream | 132800 | 26830978 ~ 26833427 (+) | True | G105569 |
| TU125244 | other | downstream | 513211 | 27211389 ~ 27214570 (+) | True | G105898 |
| trnal-caa_8 | other | downstream | 860658 | 27558836 ~ 27558946 (+) | True | trnal-caa_8 |
| trnal-caa_9 | other | downstream | 862209 | 27560387 ~ 27560497 (+) | True | trnal-caa_9 |
| XR_003402810.2 | other | downstream | 1246612 | 27944790 ~ 27966308 (+) | True | LOC113526832 |
