Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026913273.2 |
| length | 1364 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 8 |
| gene id | pdcd10a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 21664634 ~ 21682323 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006915 | apoptotic process | biological_process |
| GO:0001525 | angiogenesis | biological_process |
| GO:0003007 | heart morphogenesis | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0000139 | Golgi membrane | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU121821 | lncRNA | upstream | 159012 | 21504744 ~ 21505622 (+) | True | G102903 |
| TU121596 | lncRNA | upstream | 470230 | 21149084 ~ 21194404 (+) | True | G102703 |
| TU121459 | lncRNA | upstream | 659913 | 21004336 ~ 21004721 (+) | True | G102585 |
| TU121214 | lncRNA | upstream | 713643 | 20939413 ~ 20950991 (+) | False | prx |
| TU121238 | lncRNA | upstream | 730540 | 20930187 ~ 20934094 (+) | True | G102415 |
| TU122075 | lncRNA | downstream | 366851 | 22049174 ~ 22049382 (+) | True | G103130 |
| TU122086 | lncRNA | downstream | 446046 | 22128369 ~ 22170834 (+) | True | G103140 |
| TU122206 | lncRNA | downstream | 844052 | 22526375 ~ 22526736 (+) | True | G103246 |
| TU122232 | lncRNA | downstream | 1009769 | 22692092 ~ 22692310 (+) | True | G103270 |
| TU122262 | lncRNA | downstream | 1184417 | 22866740 ~ 22869283 (+) | True | G103297 |
| XM_034305267.1 | mRNA | upstream | 46298 | 21590626 ~ 21618336 (+) | False | golim4a |
| XM_034305271.1 | mRNA | upstream | 46298 | 21590626 ~ 21618336 (+) | False | golim4a |
| XM_034305264.1 | mRNA | upstream | 46298 | 21590627 ~ 21618336 (+) | True | golim4a |
| XM_034305268.1 | mRNA | upstream | 46298 | 21590627 ~ 21618336 (+) | False | golim4a |
| XM_034305270.1 | mRNA | upstream | 46298 | 21590627 ~ 21618336 (+) | False | golim4a |
| XM_034304980.1 | mRNA | downstream | 7105 | 21689428 ~ 21733571 (+) | True | LOC113526346 |
| XM_026914293.2 | mRNA | downstream | 80124 | 21762447 ~ 21813210 (+) | True | zbbx |
| XM_034305146.1 | mRNA | downstream | 1200948 | 22883271 ~ 22934025 (+) | False | fam168a |
| XM_034305148.1 | mRNA | downstream | 1200971 | 22883294 ~ 22934025 (+) | True | fam168a |
| XM_026913425.2 | mRNA | downstream | 1270258 | 22952581 ~ 22983599 (+) | True | LOC113526422 |
| XR_003402807.2 | other | upstream | 566793 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU120293 | other | upstream | 2540757 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_004578298.1 | other | upstream | 2543508 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120151 | other | upstream | 2870361 | 18793635 ~ 18794273 (+) | True | G101466 |
| TU120119 | other | upstream | 2924636 | 18738343 ~ 18739998 (+) | True | G101434 |
| TU122021 | other | downstream | 104793 | 21787116 ~ 21794669 (+) | False | zbbx |
| TU122269 | other | downstream | 1270354 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
| trnak-cuu_22 | other | downstream | 1480784 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| XR_003402832.2 | other | downstream | 1589735 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
| XR_003402831.1 | other | downstream | 1590985 | 23273308 ~ 23273458 (+) | True | LOC113527009 |
