RNA id: XM_026913450.2



Basic Information


Item Value
RNA id XM_026913450.2
length 1039
RNA type mRNA
GC content 0.46
exon number 5
gene id blvrb
representative True

Chromosome Information


Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 21013235 ~ 21020541 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence


CCCCCCCGCCCCGTGCCCAGCTGTTGTCACGTGACCAGAGTTCTCCTGAGAACTGAATTAGCTATAAGAGAGGCGCTCCTGTTAAGACCATAACAACTCTGTGCTGGTGGTTTTAAGTGGAATACAGCTTACAGACGCAGTAAAATGTCTGATTCGATCAAAAACGTGGCGATCTTTGGCTCGACAGGAATGACAGGCTTGGCGACGTTACCTCTTGCAGTGGCAGCAGGATATAACGTGACTGTGCTGGTGAGGGATCCGTCCAGGCTGGCCGCTGACCATAAAGCCTCCCGGATTGTGGTGGGAGACGTCCTTAACAAAGAGGATGTGAAGAAGACTCTGGAGGGTCAGGATGCTGTCATCATCATCCTGGGCACAAGGAACGATCTTAGTCCTACCACCATGATGTCTGAGGGCACACGGAACATACTGGAGGGTATGAAAGCCCGCGGCATCTGCAAAGTGATTGCCTGCATGTCCGCGTTTTTGCTGTGGGACCGGGCAAAAGTTCCTCCTCGCCTGGTTCCTGTCACTGAAGACCATGAGCGCATGTACATGTTGCTGAAGGAGTCTGGACTGGATTATGTAGCTGTGATGCCTCCACACATCGCAGATAACCATCCTCTGACTGAAAAGTACACGGTCACTGAGAACATGCTGCGAGGAAGAGTCATCTCCAAACACGACCTGGGTCACTTCTTCGTCAAGTGTCTTTCCACATCTGAGTGGGACAGGAAGACAGTGGGGGTGTGTGGGGAGTACAGTTAAACTCCCCACTGTTCTACACAACTTCAGTTCTGAGTTTCTTTTAATATGATGCTAACATTTATACGCATAAGGTTTTGCAACGTGCCTTTTTAACACGACAGATCTTCATTACATAAAAGAAATCATTGTAATTACACAGGTAATAATGCAGGATAATAACCTCATTGtgattaaaaactattttgcagtgtgtcagtTCGGTCGATTAAATGCTTCTTAGGTGTAcgatattcttttatttttaaaaattaaaaatctattttgaaACCAA

Function


GO: NA

KEGG:

id description
K05901 BLVRB; biliverdin reductase / flavin reductase

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121483 lncRNA downstream 9455 20995525 ~ 21003780 (-) True G102600
TU121291 lncRNA downstream 327050 20638871 ~ 20686185 (-) True G102458
TU121318 lncRNA downstream 432067 20578690 ~ 20581168 (-) True G102472
TU121286 lncRNA downstream 516934 20494257 ~ 20496301 (-) True G102453
TU121282 lncRNA downstream 534679 20478333 ~ 20478556 (-) True G102449
TU121581 lncRNA upstream 102774 21123315 ~ 21124955 (-) True G102691
TU121721 lncRNA upstream 288762 21309303 ~ 21312468 (-) True G102809
TU121720 lncRNA upstream 297599 21318140 ~ 21319552 (-) True G102808
TU121921 lncRNA upstream 549890 21570431 ~ 21652774 (-) True G102983
TU122044 lncRNA upstream 775232 21795773 ~ 21796243 (-) True G103099
XM_026913492.2 mRNA downstream 135 21006447 ~ 21013100 (-) False sertad3
XM_026913491.2 mRNA downstream 1998 21006445 ~ 21011237 (-) True sertad3
XM_026913549.2 mRNA downstream 83285 20924978 ~ 20929950 (-) False LOC113526481
XM_026913548.2 mRNA downstream 83285 20924978 ~ 20929950 (-) True LOC113526481
XM_034305343.1 mRNA downstream 173317 20820806 ~ 20839918 (-) False daw1
XM_026914175.2 mRNA upstream 107407 21127948 ~ 21137281 (-) True esrrd
XM_026914172.2 mRNA upstream 128522 21149063 ~ 21249503 (-) True LOC113526809
XM_026914173.2 mRNA upstream 128522 21149063 ~ 21249502 (-) False LOC113526809
XM_034305501.1 mRNA upstream 447433 21467974 ~ 21492481 (-) False LOC113526680
XM_034305500.1 mRNA upstream 447433 21467974 ~ 21492481 (-) False LOC113526680
XR_004578325.1 other downstream 135 20995341 ~ 21013100 (-) False sertad3
TU121422 other downstream 46325 20953602 ~ 20966910 (-) True G102566
XR_003402829.1 other downstream 1032976 19980069 ~ 19980259 (-) True LOC113527007
XR_003402833.1 other downstream 1662292 19350762 ~ 19350943 (-) True LOC113527011
TU119855 other downstream 2816429 18187447 ~ 18196806 (-) True G101178
XR_004578321.1 other upstream 1214162 22234703 ~ 22306769 (-) False si
XR_004578330.1 other upstream 2570404 23590945 ~ 23610448 (-) True mmp23bb
TU123617 other upstream 3602975 24623516 ~ 24711368 (-) True G104473
XR_003402792.2 other upstream 3732071 24752612 ~ 24762781 (-) False clasrp
XR_003402763.2 other upstream 4364784 25385325 ~ 25548928 (-) False si:cabz01090165.1

Expression Profile