Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026927205.2 |
| length | 5124 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 21 |
| gene id | igf1ra |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 14536079 ~ 14629951 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0021522 | spinal cord motor neuron differentiation | biological_process |
| GO:0018108 | peptidyl-tyrosine phosphorylation | biological_process |
| GO:0048752 | semicircular canal morphogenesis | biological_process |
| GO:0031076 | embryonic camera-type eye development | biological_process |
| GO:0009952 | anterior/posterior pattern specification | biological_process |
| GO:0048009 | insulin-like growth factor receptor signaling pathway | biological_process |
| GO:0031101 | fin regeneration | biological_process |
| GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | biological_process |
| GO:0003007 | heart morphogenesis | biological_process |
| GO:0046777 | protein autophosphorylation | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0043548 | phosphatidylinositol 3-kinase binding | molecular_function |
| GO:0043560 | insulin receptor substrate binding | molecular_function |
| GO:0005520 | insulin-like growth factor binding | molecular_function |
| GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004714 | transmembrane receptor protein tyrosine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU117933 | lncRNA | downstream | 2514 | 14533820 ~ 14536010 (-) | True | G99453 |
| XR_003403487.2 | lncRNA | downstream | 18740 | 14510924 ~ 14519784 (-) | True | LOC113534271 |
| TU117912 | lncRNA | downstream | 85417 | 14448856 ~ 14453107 (-) | True | G99433 |
| TU117867 | lncRNA | downstream | 182905 | 14349718 ~ 14355619 (-) | True | G99401 |
| TU117878 | lncRNA | downstream | 204390 | 14328927 ~ 14334134 (-) | True | G99408 |
| TU117973 | lncRNA | upstream | 18127 | 14648078 ~ 14648993 (-) | True | G99493 |
| TU118323 | lncRNA | upstream | 519452 | 15149403 ~ 15150315 (-) | True | G99780 |
| TU118318 | lncRNA | upstream | 530252 | 15160203 ~ 15168426 (-) | True | G99775 |
| TU118330 | lncRNA | upstream | 541360 | 15171311 ~ 15173434 (-) | True | G99784 |
| TU118350 | lncRNA | upstream | 546224 | 15176175 ~ 15180912 (-) | True | G99801 |
| XM_026927335.2 | mRNA | downstream | 8667 | 14520667 ~ 14529857 (-) | True | synm |
| XM_026927341.2 | mRNA | downstream | 36294 | 14454337 ~ 14502230 (-) | True | cttnbp2 |
| XM_026927342.2 | mRNA | downstream | 36295 | 14454337 ~ 14502229 (-) | False | cttnbp2 |
| XM_026927052.2 | mRNA | downstream | 115748 | 14401868 ~ 14422776 (-) | False | asz1 |
| XM_026927160.2 | mRNA | upstream | 28019 | 14657970 ~ 14667731 (-) | True | anpepa |
| XM_026927018.2 | mRNA | upstream | 40362 | 14670313 ~ 14673362 (-) | False | si:dkey-12e7.1 |
| XM_034304965.1 | mRNA | upstream | 40362 | 14670313 ~ 14673239 (-) | False | si:dkey-12e7.1 |
| XM_034304963.1 | mRNA | upstream | 40362 | 14670313 ~ 14673239 (-) | False | si:dkey-12e7.1 |
| XM_034304964.1 | mRNA | upstream | 40362 | 14670313 ~ 14673160 (-) | True | si:dkey-12e7.1 |
| XR_003403523.2 | other | downstream | 191516 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 749677 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003403534.1 | other | downstream | 750325 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403537.1 | other | downstream | 750738 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_003403542.1 | other | downstream | 751322 | 13787134 ~ 13787202 (-) | True | LOC113534850 |
| TU118530 | other | upstream | 717215 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_004578368.1 | other | upstream | 3456704 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU119855 | other | upstream | 3557496 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_003402833.1 | other | upstream | 4720811 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 5350118 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
