Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402828.1 |
| length | 666 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC113527003 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 19893155 ~ 19897283 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120796 | lncRNA | upstream | 38412 | 19854517 ~ 19854743 (+) | True | G102050 |
| TU120731 | lncRNA | upstream | 185582 | 19706351 ~ 19707573 (+) | True | G101990 |
| TU120645 | lncRNA | upstream | 307720 | 19585185 ~ 19585435 (+) | True | G101919 |
| TU120627 | lncRNA | upstream | 405873 | 19486401 ~ 19487282 (+) | True | G101904 |
| XR_004578348.1 | lncRNA | upstream | 506218 | 19362733 ~ 19386937 (+) | True | LOC117597585 |
| TU120841 | lncRNA | downstream | 26979 | 19924262 ~ 19928951 (+) | True | G102091 |
| TU120843 | lncRNA | downstream | 38880 | 19936163 ~ 19936424 (+) | True | G102093 |
| TU120840 | lncRNA | downstream | 70498 | 19967781 ~ 19969787 (+) | False | cdon |
| TU120839 | lncRNA | downstream | 74410 | 19971693 ~ 19972119 (+) | True | G102089 |
| TU120849 | lncRNA | downstream | 85664 | 19982947 ~ 19983147 (+) | True | G102098 |
| XM_026914298.2 | mRNA | upstream | 47318 | 19835533 ~ 19845837 (+) | True | si:ch211-151h10.2 |
| XM_026913948.2 | mRNA | upstream | 57726 | 19801828 ~ 19835429 (+) | True | prdm10 |
| XM_026914000.2 | mRNA | downstream | 22766 | 19920049 ~ 19968011 (+) | True | cdon |
| XM_026914001.2 | mRNA | downstream | 23337 | 19920620 ~ 19968011 (+) | False | cdon |
| XM_034305406.1 | mRNA | downstream | 23582 | 19920865 ~ 19968011 (+) | False | cdon |
| XM_026913610.2 | mRNA | downstream | 107073 | 20004356 ~ 20053142 (+) | False | bcl9l |
| XM_026913607.2 | mRNA | downstream | 107075 | 20004358 ~ 20053142 (+) | False | bcl9l |
| TU120293 | other | upstream | 769278 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_004578298.1 | other | upstream | 772029 | 18957428 ~ 19121126 (+) | False | sema4ba |
| TU120151 | other | upstream | 1098882 | 18793635 ~ 18794273 (+) | True | G101466 |
| TU120119 | other | upstream | 1153157 | 18738343 ~ 18739998 (+) | True | G101434 |
| TU120104 | other | upstream | 1293780 | 18598714 ~ 18599375 (+) | True | G101419 |
| XR_003402807.2 | other | downstream | 1128744 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU122021 | other | downstream | 1889833 | 21787116 ~ 21794669 (+) | False | zbbx |
| TU122269 | other | downstream | 3055394 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
| trnak-cuu_22 | other | downstream | 3265824 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| XR_003402832.2 | other | downstream | 3374775 | 23272058 ~ 23272208 (+) | True | LOC113527010 |
