Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402832.2 |
| length | 151 |
| RNA type | ncRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | LOC113527010 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 23272058 ~ 23272208 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122343 | lncRNA | upstream | 12867 | 23175551 ~ 23259191 (+) | False | LOC113526573 |
| TU122349 | lncRNA | upstream | 84395 | 23187152 ~ 23187663 (+) | True | G103376 |
| TU122322 | lncRNA | upstream | 123242 | 23140847 ~ 23148816 (+) | False | relt |
| TU122293 | lncRNA | upstream | 165817 | 23106142 ~ 23106241 (+) | True | G103327 |
| TU122297 | lncRNA | upstream | 265418 | 23000367 ~ 23006640 (+) | True | G103331 |
| TU122607 | lncRNA | downstream | 143287 | 23415495 ~ 23416103 (+) | True | G103606 |
| TU122692 | lncRNA | downstream | 273909 | 23546117 ~ 23546390 (+) | True | G103688 |
| TU122709 | lncRNA | downstream | 300343 | 23572551 ~ 23575616 (+) | False | serp1 |
| TU122863 | lncRNA | downstream | 426644 | 23698852 ~ 23702964 (+) | False | G103828 |
| TU122862 | lncRNA | downstream | 429382 | 23701590 ~ 23702964 (+) | True | G103828 |
| XM_026913480.2 | mRNA | upstream | 4238 | 23260622 ~ 23267820 (+) | True | LOC113526446 |
| XM_034305398.1 | mRNA | upstream | 7923 | 23260622 ~ 23264135 (+) | False | LOC113526446 |
| XM_026913749.2 | mRNA | upstream | 12801 | 23163646 ~ 23259257 (+) | True | LOC113526573 |
| XM_026913750.2 | mRNA | upstream | 12801 | 23163647 ~ 23259257 (+) | False | LOC113526573 |
| XM_026914310.2 | mRNA | upstream | 123186 | 23113084 ~ 23148872 (+) | False | relt |
| XM_026914028.2 | mRNA | downstream | 3507 | 23275715 ~ 23280561 (+) | True | kctd14 |
| XM_026914025.2 | mRNA | downstream | 9211 | 23281419 ~ 23297448 (+) | True | ints4 |
| XM_026914024.2 | mRNA | downstream | 27348 | 23299556 ~ 23316798 (+) | True | rsf1a |
| XM_026914027.2 | mRNA | downstream | 49419 | 23321627 ~ 23328390 (+) | True | clns1a |
| XM_026914026.2 | mRNA | downstream | 49419 | 23321627 ~ 23326611 (+) | False | clns1a |
| trnak-cuu_22 | other | upstream | 108879 | 23163107 ~ 23163179 (+) | True | trnak-cuu_22 |
| TU122269 | other | upstream | 290908 | 22952677 ~ 22981150 (+) | False | LOC113526422 |
| TU122021 | other | upstream | 1477389 | 21787116 ~ 21794669 (+) | False | zbbx |
| XR_003402807.2 | other | upstream | 2174217 | 21026027 ~ 21097841 (+) | False | LOC113526807 |
| TU120293 | other | upstream | 4148181 | 19122612 ~ 19123877 (+) | True | G101602 |
| XR_003402831.1 | other | downstream | 1100 | 23273308 ~ 23273458 (+) | True | LOC113527009 |
| XR_003402830.2 | other | downstream | 2151 | 23274359 ~ 23274509 (+) | True | LOC113527008 |
| TU122865 | other | downstream | 342895 | 23615103 ~ 23629723 (+) | True | G103830 |
| TU122935 | other | downstream | 467294 | 23739502 ~ 23742315 (+) | False | cstf3 |
| TU123976 | other | downstream | 2022691 | 25294899 ~ 25306811 (+) | True | G104781 |
