Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403544.1 |
| length | 70 |
| RNA type | ncRNA |
| GC content | 0.41 |
| exon number | 1 |
| gene id | LOC113534852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 13783555 ~ 13783624 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU117536 | lncRNA | downstream | 15085 | 13732951 ~ 13768470 (-) | True | G99134 |
| TU117519 | lncRNA | downstream | 135769 | 13645575 ~ 13647786 (-) | True | G99118 |
| TU117412 | lncRNA | downstream | 465547 | 13311405 ~ 13318008 (-) | False | LOC117597528 |
| XR_004578307.1 | lncRNA | downstream | 471209 | 13311395 ~ 13312346 (-) | True | LOC117597528 |
| TU117133 | lncRNA | downstream | 601005 | 13182343 ~ 13182550 (-) | True | G98790 |
| TU117568 | lncRNA | upstream | 59195 | 13842819 ~ 13843229 (-) | True | G99165 |
| TU117569 | lncRNA | upstream | 60375 | 13843999 ~ 13844237 (-) | True | G99166 |
| TU117593 | lncRNA | upstream | 148929 | 13932553 ~ 13932934 (-) | True | G99184 |
| TU117597 | lncRNA | upstream | 161127 | 13944751 ~ 13946911 (-) | True | G99188 |
| TU117596 | lncRNA | upstream | 166523 | 13950147 ~ 13950721 (-) | True | G99187 |
| XM_026927092.2 | mRNA | downstream | 20099 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927093.2 | mRNA | downstream | 20099 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927089.2 | mRNA | downstream | 20099 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927090.2 | mRNA | downstream | 20099 | 13652058 ~ 13763456 (-) | True | megf11 |
| XM_026927133.2 | mRNA | downstream | 139983 | 13612796 ~ 13643572 (-) | True | dennd4a |
| XM_026927442.2 | mRNA | upstream | 2523 | 13786147 ~ 13789542 (-) | True | rpl4 |
| XM_026927651.2 | mRNA | upstream | 14000 | 13797624 ~ 13805174 (-) | True | lctlb |
| XM_034305074.1 | mRNA | upstream | 23360 | 13806984 ~ 13809993 (-) | True | snapc5 |
| XM_026927443.2 | mRNA | upstream | 23360 | 13806984 ~ 13809991 (-) | False | snapc5 |
| XM_026927417.2 | mRNA | upstream | 172809 | 13956433 ~ 13961386 (-) | True | aagab |
| XR_003403538.1 | other | downstream | 18499 | 13764926 ~ 13765056 (-) | True | LOC113534845 |
| trnaq-cug_10 | other | downstream | 138075 | 13645409 ~ 13645480 (-) | True | trnaq-cug_10 |
| XR_003403499.2 | other | downstream | 220981 | 13550680 ~ 13562574 (-) | True | c6h15orf39 |
| XR_003403539.1 | other | downstream | 346580 | 13436901 ~ 13436975 (-) | True | LOC113534846 |
| TU117111 | other | downstream | 731244 | 13045823 ~ 13052311 (-) | True | G98770 |
| XR_003403543.1 | other | upstream | 3154 | 13786778 ~ 13786848 (-) | True | LOC113534851 |
| XR_003403542.1 | other | upstream | 3510 | 13787134 ~ 13787202 (-) | True | LOC113534850 |
| XR_003403537.1 | other | upstream | 4033 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
| XR_003403534.1 | other | upstream | 4478 | 13788102 ~ 13788199 (-) | True | LOC113534840 |
| XR_003403533.2 | other | upstream | 5127 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
