Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnaq-cug_10 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.50 |
| exon number | 1 |
| gene id | trnaq-cug_10 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 13645409 ~ 13645480 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU117412 | lncRNA | downstream | 327401 | 13311405 ~ 13318008 (-) | False | LOC117597528 |
| XR_004578307.1 | lncRNA | downstream | 333063 | 13311395 ~ 13312346 (-) | True | LOC117597528 |
| TU117133 | lncRNA | downstream | 462859 | 13182343 ~ 13182550 (-) | True | G98790 |
| TU117117 | lncRNA | downstream | 510236 | 13129200 ~ 13135173 (-) | True | G98776 |
| TU117108 | lncRNA | downstream | 616812 | 13027458 ~ 13028597 (-) | True | G98767 |
| TU117519 | lncRNA | upstream | 95 | 13645575 ~ 13647786 (-) | True | G99118 |
| TU117536 | lncRNA | upstream | 87471 | 13732951 ~ 13768470 (-) | True | G99134 |
| XR_003403491.2 | lncRNA | upstream | 137295 | 13782775 ~ 13784737 (-) | True | LOC113534347 |
| XR_003403492.2 | lncRNA | upstream | 137295 | 13782775 ~ 13784674 (-) | False | LOC113534347 |
| TU117539 | lncRNA | upstream | 137312 | 13782792 ~ 13784697 (-) | False | LOC113534347 |
| XM_026927136.2 | mRNA | downstream | 1837 | 13612796 ~ 13643572 (-) | False | dennd4a |
| XM_026927135.2 | mRNA | downstream | 1837 | 13612796 ~ 13643572 (-) | False | dennd4a |
| XM_026927134.2 | mRNA | downstream | 1837 | 13612796 ~ 13643572 (-) | False | dennd4a |
| XM_026927133.2 | mRNA | downstream | 1837 | 13612796 ~ 13643572 (-) | True | dennd4a |
| XM_026927280.2 | mRNA | downstream | 56425 | 13583262 ~ 13588984 (-) | False | ints14 |
| XM_026927092.2 | mRNA | upstream | 6578 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927093.2 | mRNA | upstream | 6578 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927089.2 | mRNA | upstream | 6578 | 13652058 ~ 13763456 (-) | False | megf11 |
| XM_026927090.2 | mRNA | upstream | 6578 | 13652058 ~ 13763456 (-) | True | megf11 |
| XM_026927442.2 | mRNA | upstream | 140667 | 13786147 ~ 13789542 (-) | True | rpl4 |
| XR_003403499.2 | other | downstream | 82835 | 13550680 ~ 13562574 (-) | True | c6h15orf39 |
| XR_003403539.1 | other | downstream | 208434 | 13436901 ~ 13436975 (-) | True | LOC113534846 |
| TU117111 | other | downstream | 593098 | 13045823 ~ 13052311 (-) | True | G98770 |
| TU116638 | other | downstream | 1221431 | 12421102 ~ 12423978 (-) | True | akip1 |
| XR_003403510.2 | other | downstream | 1240128 | 12397687 ~ 12405281 (-) | False | znf143b |
| XR_003403538.1 | other | upstream | 119446 | 13764926 ~ 13765056 (-) | True | LOC113534845 |
| XR_003403544.1 | other | upstream | 138075 | 13783555 ~ 13783624 (-) | True | LOC113534852 |
| XR_003403543.1 | other | upstream | 141298 | 13786778 ~ 13786848 (-) | True | LOC113534851 |
| XR_003403542.1 | other | upstream | 141654 | 13787134 ~ 13787202 (-) | True | LOC113534850 |
| XR_003403537.1 | other | upstream | 142177 | 13787657 ~ 13787786 (-) | True | LOC113534844 |
