RNA id: TU146892


Basic Information

Item Value
RNA id TU146892
length 460
RNA type TUCP
GC content 0.45
exon number 2
gene id G124387
representative False

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 12688 ~ 23292 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

gtgagtgtgtgtccatcCATTTTCCCATATTTACTTCCATGTGTTTCAGTAACAGCAGTTCAGTAACAGCAGTTTCAGTAGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGTTGCTACTGAAACTGTTGCTACTGAAACTGCTGCTACTGAAACTGTTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGTTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTGAAACTGCTGCTACTgaaactgctgctgctgaaacTGCTGCTACTGAAACTGCTGCTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU146889 lncRNA downstream 589 13994 ~ 15511 (+) False G124387
TU146890 lncRNA downstream 589 13994 ~ 15158 (+) False G124387
TU146893 lncRNA downstream 589 13994 ~ 15511 (+) False G124387
TU146895 lncRNA downstream 801 14206 ~ 15511 (+) False G124387
TU146887 lncRNA downstream 1494 14899 ~ 23292 (+) False G124387
XM_034306570.1 mRNA downstream 202756 216161 ~ 217382 (+) True LOC117597813
XM_034306571.1 mRNA downstream 247994 261399 ~ 264259 (+) True LOC117597814
XM_034306644.1 mRNA downstream 321498 334903 ~ 341086 (+) True fpgt
XM_034306641.1 mRNA downstream 329257 342662 ~ 366781 (+) True tnni3k
XM_034306643.1 mRNA downstream 329257 342662 ~ 366781 (+) False tnni3k
TU146909 other downstream 35573 48978 ~ 51072 (+) True G124399
TU146916 other downstream 56668 70073 ~ 86083 (+) True G124403
TU146973 other downstream 164257 177662 ~ 178417 (+) True G124442
TU147002 other downstream 259012 272417 ~ 330399 (+) True G124462
TU147050 other downstream 386351 399756 ~ 407434 (+) True G124498

Expression Profile