Item | Value |
---|---|
RNA id | TU147065 |
length | 581 |
lncRNA type | intronic |
GC content | 0.41 |
exon number | 2 |
gene id | G124506 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047602.1 |
NCBI id | CM018548.1 |
chromosome length | 30442583 |
location | 436162 ~ 436973 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU147051 | lncRNA | upstream | 34066 | 400915 ~ 402096 (+) | True | G124499 |
TU147026 | lncRNA | upstream | 94404 | 341438 ~ 341758 (+) | True | G124481 |
TU146989 | lncRNA | upstream | 205294 | 207271 ~ 230868 (+) | True | G124453 |
XR_004578543.1 | lncRNA | upstream | 226749 | 208161 ~ 209413 (+) | True | LOC117597786 |
TU146983 | lncRNA | upstream | 235219 | 197931 ~ 200943 (+) | True | G124451 |
TU147071 | lncRNA | downstream | 24539 | 461512 ~ 466459 (+) | True | G124511 |
TU147072 | lncRNA | downstream | 26606 | 463579 ~ 464969 (+) | True | G124512 |
TU147080 | lncRNA | downstream | 52894 | 489867 ~ 490074 (+) | True | G124517 |
TU147082 | lncRNA | downstream | 57919 | 494892 ~ 517899 (+) | True | G124519 |
TU147083 | lncRNA | downstream | 66475 | 503448 ~ 503792 (+) | True | G124520 |
XM_034306641.1 | mRNA | upstream | 69381 | 342662 ~ 366781 (+) | True | tnni3k |
XM_034306643.1 | mRNA | upstream | 69381 | 342662 ~ 366781 (+) | False | tnni3k |
XM_034306642.1 | mRNA | upstream | 69381 | 342662 ~ 366781 (+) | False | tnni3k |
XM_034306644.1 | mRNA | upstream | 95076 | 334903 ~ 341086 (+) | True | fpgt |
XM_034306571.1 | mRNA | upstream | 171903 | 261399 ~ 264259 (+) | True | LOC117597814 |
XM_034306306.1 | mRNA | downstream | 30788 | 467761 ~ 478047 (+) | True | LOC113541233 |
XM_026938098.2 | mRNA | downstream | 35567 | 472540 ~ 476546 (+) | False | LOC113541233 |
XM_026938255.2 | mRNA | downstream | 53472 | 490445 ~ 494112 (+) | True | tnfsf10 |
XM_034306924.1 | mRNA | downstream | 70091 | 507064 ~ 508910 (+) | True | si:ch73-70k4.1 |
XM_026912303.2 | mRNA | downstream | 78337 | 515310 ~ 534999 (+) | True | LOC113525715 |
TU147050 | other | upstream | 28728 | 399756 ~ 407434 (+) | True | G124498 |
TU147002 | other | upstream | 105763 | 272417 ~ 330399 (+) | True | G124462 |
TU146973 | other | upstream | 257745 | 177662 ~ 178417 (+) | True | G124442 |
TU146916 | other | upstream | 350079 | 70073 ~ 86083 (+) | True | G124403 |
TU146909 | other | upstream | 385090 | 48978 ~ 51072 (+) | True | G124399 |
TU147085 | other | downstream | 70122 | 507095 ~ 508908 (+) | False | si:ch73-70k4.1 |
TU147120 | other | downstream | 208993 | 645966 ~ 647953 (+) | True | G124541 |
TU147121 | other | downstream | 208993 | 645966 ~ 647492 (+) | False | G124541 |
TU147123 | other | downstream | 208993 | 645966 ~ 647492 (+) | False | G124541 |
TU147149 | other | downstream | 267616 | 704589 ~ 705857 (+) | True | G124565 |